| __getitem__(self, i) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| __init__(self, config, root=None, step=-1, verbose=1, threads=-1, exit_on_error=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| __len__(self) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| affdof(self, imgid) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| age(self, imgid) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| ages(self) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| avgdof(self, t, path=None, step=-1, force=False, create=True, batch=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| avgdofs(self, step=-1, force=False, create=True, queue=None, batchname="avgdofs") | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| avgimg(self, t, channel=None, label=0, path=None, sharpen=True, outdir=None, step=-1, decomposed=True, force=False, create=True, batch=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| avgimgs(self, step=-1, ages=[], channels=[], labels={}, sharpen=True, outdir=None, decomposed=True, force=False, create=True, queue=None, batchname="avgimgs") | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| compose(self, step=-1, ages=[], allpairs=False, force=False, create=True, queue=None, batchname="compose") | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| construct(self, start=-1, niter=10, outdir=None, force=False, queue=None) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| defimg(self, imgid, t, channel=None, path=None, step=-1, decomposed=True, force=False, create=True, batch=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| defimgs(self, ages=[], channels=[], step=-1, decomposed=True, force=False, create=True, queue=None, batchname="defimgs") | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| deform(self, i, t, path=None, channel=None, force=False, create=True) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| deformation(self, i, t=None, force=False, create=True) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| doftable(self, t, step=-1, force=False, create=True, batch=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| evaluate(self, ages=[], step=-1, force=False, queue=None) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| growth(self, t1, t2, step=-1, force=False, create=True, batch=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| image(self, imgid, channel=None, label=0, force=False, create=True) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| imgdof(self, imgid, t, step=-1, decomposed=False, force=False, create=True, batch=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| imgdofs(self, ages=[], step=-1, force=False, create=True, queue=None, batchname="imgdofs") | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| imgtable(self, t, channel=None, step=-1, decomposed=True, force=False, create=True, batch=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| info(self, msg, step=-1) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| interpolate(self, t, path=None, channel=None, interp="default", deform=False, sigma=0, force=False, create=True) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| normtime(self, t) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| parin(self, step=-1, force=False, create=True) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| regcfg(self, step=-1) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| regdof(self, imgid, t=None, step=-1, path=None, force=False, create=True, batch=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| regdofs(self, step=-1, force=False, create=True, queue=None, batchname="register") | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| rmtemp(self) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| splitchannel(self, channel=None) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| stdev(self, t) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| subdir(self, step=-1) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| template(self, i, channel=None) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| timeindex(self, t) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| timename(self, t1, t2=None) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| view(self, i=None, channel=None) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| wait(self, jobs, interval=60, verbose=5) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| weight(self, t, mean, sigma=0, normalize=True, epsilon=None) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |
| weights(self, mean=None, sigma=0, zero=False) | mirtk.atlas.spatiotemporal.SpatioTemporalAtlas | |