| _attr | mirtk::FreeFormTransformation | protected |
| _CPFunc | mirtk::FreeFormTransformation | protected |
| _CPImage | mirtk::FreeFormTransformation | protected |
| _CPStatus | mirtk::FreeFormTransformation | protected |
| _CPValue | mirtk::FreeFormTransformation | protected |
| _dt | mirtk::FreeFormTransformation | protected |
| _dx | mirtk::FreeFormTransformation | protected |
| _dy | mirtk::FreeFormTransformation | protected |
| _dz | mirtk::FreeFormTransformation | protected |
| _FFD | mirtk::BSplineFreeFormTransformation3D | protected |
| _FFD2D | mirtk::BSplineFreeFormTransformation3D | protected |
| _matL2W | mirtk::FreeFormTransformation | protected |
| _matW2L | mirtk::FreeFormTransformation | protected |
| _NumberOfDOFs | mirtk::Transformation | protected |
| _Param | mirtk::Transformation | protected |
| _Status | mirtk::Transformation | protected |
| _t | mirtk::FreeFormTransformation | protected |
| _x | mirtk::FreeFormTransformation | protected |
| _y | mirtk::FreeFormTransformation | protected |
| _z | mirtk::FreeFormTransformation | protected |
| ActualNumberOfDOFs() const | mirtk::FreeFormTransformation | inline |
| Add(const DOFValue *) | mirtk::Transformation | inlinevirtual |
| AddApproximateSplineCoefficients(const double *, const double *, const double *, const double *, const double *, const double *, int, double *, double=1., bool=false) const | mirtk::BSplineFreeFormTransformation3D | |
| AddObserver(Observer &) | mirtk::Observable | inline |
| Approximate(const Transformation *, int=1, double=.0) | mirtk::FreeFormTransformation | virtual |
| Approximate(const ImageAttributes &, double *, double *, double *, int=1, double=.0) | mirtk::FreeFormTransformation | virtual |
| Approximate(const double *, const double *, const double *, double *, double *, double *, int, int=1, double=.0) | mirtk::FreeFormTransformation | virtual |
| Approximate(const double *, const double *, const double *, const double *, double *, double *, double *, int, int=1, double=.0) | mirtk::FreeFormTransformation | virtual |
| mirtk::Transformation::Approximate(const ImageAttributes &, const Transformation *, int=1, double=.0) | mirtk::Transformation | virtual |
| mirtk::Transformation::Approximate(GenericImage< double > &, int=1, double=.0) | mirtk::Transformation | virtual |
| ApproximateAsNew(const ImageAttributes &, const Transformation *, int=1, double=.0) | mirtk::BSplineFreeFormTransformationSV | virtual |
| ApproximateAsNew(GenericImage< double > &, int=1, double=.0) | mirtk::BSplineFreeFormTransformationSV | virtual |
| ApproximateAsNew(GenericImage< double > &, bool, int=3, int=8) | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::BSplineFreeFormTransformation3D::ApproximateAsNew(const Transformation *, int=1, double=.0) | mirtk::FreeFormTransformation | virtual |
| mirtk::BSplineFreeFormTransformation3D::ApproximateAsNew(const ImageAttributes &, double *, double *, double *, int=1, double=.0) | mirtk::FreeFormTransformation | virtual |
| mirtk::Transformation::ApproximateAsNew(const double *, const double *, const double *, double *, double *, double *, int, int=1, double=.0) | mirtk::Transformation | virtual |
| mirtk::Transformation::ApproximateAsNew(const double *, const double *, const double *, const double *, double *, double *, double *, int, int=1, double=.0) | mirtk::Transformation | virtual |
| ApproximateDOFs(const double *, const double *, const double *, const double *, const double *, const double *, const double *, int) | mirtk::BSplineFreeFormTransformationSV | virtual |
| ApproximateDOFsGradient(const double *, const double *, const double *, const double *, const double *, const double *, const double *, int, double *, double=1.0) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| ApproximateGradient(const ImageAttributes &, const double *, const double *, const double *, double *, double=1.0) const | mirtk::Transformation | virtual |
| ApproximateGradient(const double *, const double *, const double *, const double *, const double *, const double *, int, double *, double=1.0) const | mirtk::Transformation | virtual |
| ApproximateGradient(const double *, const double *, const double *, const double *, const double *, const double *, const double *, int, double *, double=1.0) const | mirtk::Transformation | virtual |
| ApproximateVelocitiesAsNew(GenericImage< double > &) | mirtk::BSplineFreeFormTransformationSV | virtual |
| ApproximationDomain(const ImageAttributes &, const Transformation *) | mirtk::BSplineFreeFormTransformationSV | virtual |
| Attributes() const | mirtk::FreeFormTransformation | inline |
| Bending3D(const Matrix [3]) | mirtk::FreeFormTransformation | inlinestatic |
| BendingEnergy(double, double, double, double=0, double=NaN, bool=true) const | mirtk::BSplineFreeFormTransformation3D | virtual |
| BendingEnergy(bool=false, bool=true) const | mirtk::BSplineFreeFormTransformation3D | virtual |
| BendingEnergy(const ImageAttributes &, double=NaN, bool=true) const | mirtk::BSplineFreeFormTransformation3D | virtual |
| BendingEnergyGradient(double *, double=1, bool=false, bool=true, bool=true) const | mirtk::BSplineFreeFormTransformation3D | virtual |
| BoundingBox(int, double &, double &, double &, double &, double &, double &, double=1) const | mirtk::BSplineFreeFormTransformation3D | virtual |
| mirtk::FreeFormTransformation3D::BoundingBox(double &, double &) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(double &, double &, double &, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(Point &, Point &) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(double &, double &, double &, double &, double &, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(Point &, double &, Point &, double &) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(int, double &, double &, double=1) const | mirtk::FreeFormTransformation | inlinevirtual |
| mirtk::FreeFormTransformation3D::BoundingBox(int, double &, double &, double &, double &, double &, double &, double &, double &, double=1) const | mirtk::FreeFormTransformation | inlinevirtual |
| mirtk::FreeFormTransformation3D::BoundingBox(int, Point &, Point &, double=1) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(const ImageAttributes &, int, int &, int &, int &, int &, int &, int &, double=1) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(const ImageAttributes &, int, int &, int &, int &, int &, int &, int &, int &, int &, double=1) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(const Image *, int, int &, int &, int &, int &, int &, int &, double=1) const | mirtk::FreeFormTransformation | inline |
| mirtk::FreeFormTransformation3D::BoundingBox(const Image *, int, int &, int &, int &, int &, int &, int &, int &, int &, double=1) const | mirtk::FreeFormTransformation | inline |
| BoundingBoxCP(int cp, Point &, Point &, double=1) const | mirtk::FreeFormTransformation3D | inline |
| BoundingBoxImage(const BaseImage *, int, int &, int &, int &, int &, int &, int &, double=1) const | mirtk::FreeFormTransformation3D | inline |
| Broadcast(Event, const void *=NULL) | mirtk::Observable | inline |
| BSplineFreeFormTransformation3D() | mirtk::BSplineFreeFormTransformation3D | |
| BSplineFreeFormTransformation3D(double, double, double, double, double, double, double, double, double, double *, double *, double *) | mirtk::BSplineFreeFormTransformation3D | |
| BSplineFreeFormTransformation3D(const ImageAttributes &, double=-1, double=-1, double=-1) | mirtk::BSplineFreeFormTransformation3D | explicit |
| BSplineFreeFormTransformation3D(const BaseImage &, double, double, double) | mirtk::BSplineFreeFormTransformation3D | explicit |
| BSplineFreeFormTransformation3D(const GenericImage< double > &, bool=false) | mirtk::BSplineFreeFormTransformation3D | explicit |
| BSplineFreeFormTransformation3D(const BSplineFreeFormTransformation3D &) | mirtk::BSplineFreeFormTransformation3D | |
| BSplineFreeFormTransformationSV() | mirtk::BSplineFreeFormTransformationSV | |
| BSplineFreeFormTransformationSV(const ImageAttributes &, double=-1, double=-1, double=-1) | mirtk::BSplineFreeFormTransformationSV | explicit |
| BSplineFreeFormTransformationSV(const BaseImage &, double, double, double) | mirtk::BSplineFreeFormTransformationSV | explicit |
| BSplineFreeFormTransformationSV(const GenericImage< double > &, bool=false) | mirtk::BSplineFreeFormTransformationSV | explicit |
| BSplineFreeFormTransformationSV(const BSplineFreeFormTransformationSV &) | mirtk::BSplineFreeFormTransformationSV | |
| CanModifyDisplacement(int=-1) const | mirtk::BSplineFreeFormTransformation3D | virtual |
| CanRead(TransformationType) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| CheckHeader(const char *) | mirtk::Transformation | static |
| ClearObservers() | mirtk::Observable | inline |
| CombineWith(const Transformation *) | mirtk::BSplineFreeFormTransformationSV | virtual |
| CombineWith(const BSplineFreeFormTransformationSV *) | mirtk::BSplineFreeFormTransformationSV | virtual |
| ControlPointLocation(int, double &, double &) const | mirtk::FreeFormTransformation | inline |
| ControlPointLocation(int, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| ControlPointLocation(int) const | mirtk::FreeFormTransformation | inline |
| CopyFrom(const Transformation *) | mirtk::FreeFormTransformation | inlinevirtual |
| CPExtrapolator typedef | mirtk::FreeFormTransformation | |
| CPImage typedef | mirtk::FreeFormTransformation | |
| CPInterpolator typedef | mirtk::FreeFormTransformation | |
| CPStatus typedef | mirtk::FreeFormTransformation | |
| CPValue typedef | mirtk::FreeFormTransformation | |
| CropPadPassiveCPs(int=0, bool=false) | mirtk::FreeFormTransformation | |
| CropPadPassiveCPs(int, int, int=0, int=0, bool=false) | mirtk::FreeFormTransformation | virtual |
| DefaultAttributes(double, double, double, double, double, double, double, double, double, const double *, const double *, const double *) | mirtk::FreeFormTransformation3D | static |
| mirtk::FreeFormTransformation::DefaultAttributes(const ImageAttributes &attr, double dx=-1.0, double dy=-1.0, double dz=-1.0, double dt=-1.0) | mirtk::FreeFormTransformation | static |
| mirtk::FreeFormTransformation::DefaultAttributes(double, double, double, double, double, double, double, double, double, double, double, double, const double *, const double *, const double *) | mirtk::FreeFormTransformation | static |
| DeleteObserver(Observer &) | mirtk::Observable | inline |
| DeriveJacobianWrtDOF(Matrix &, int, double, double, double, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformation3D | inlinevirtual |
| Displacement(GenericImage< double > &, double, double=NaN, const WorldCoordsImage *=NULL) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| Displacement(GenericImage< float > &, double, double=NaN, const WorldCoordsImage *=NULL) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::BSplineFreeFormTransformation3D::Displacement(double &, double &, double &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| mirtk::BSplineFreeFormTransformation3D::Displacement(const ImageAttributes &, double *, double *, double *) const | mirtk::Transformation | virtual |
| mirtk::BSplineFreeFormTransformation3D::Displacement(GenericImage< double > &, double=NaN, const WorldCoordsImage *=NULL) const | mirtk::Transformation | virtual |
| mirtk::BSplineFreeFormTransformation3D::Displacement(GenericImage< float > &, double=NaN, const WorldCoordsImage *=NULL) const | mirtk::Transformation | virtual |
| DisplacementAfterDOFChange(int dof, double dv, GenericImage< double > &dx, double t, double t0=-1, const WorldCoordsImage *i2w=NULL) const | mirtk::BSplineFreeFormTransformation3D | virtual |
| DOFBoundingBox(const ImageAttributes &, int, int &, int &, int &, int &, int &, int &, double=1) const | mirtk::FreeFormTransformation | inline |
| DOFBoundingBox(const Image *, int, int &, int &, int &, int &, int &, int &, double=1) const | mirtk::FreeFormTransformation | inlinevirtual |
| DOFGradientNorm(const double *) const | mirtk::FreeFormTransformation | inlinevirtual |
| DOFStatus typedef | mirtk::Transformation | |
| DOFToDimension(int) const | mirtk::FreeFormTransformation | inline |
| DOFToIndex(int) const | mirtk::FreeFormTransformation | inline |
| DOFValue typedef | mirtk::Transformation | |
| Evaluate(double &, double &, double &, double) const | mirtk::BSplineFreeFormTransformationSV | inline |
| mirtk::BSplineFreeFormTransformation3D::Evaluate(double &, double &, double &, int, int) const | mirtk::BSplineFreeFormTransformation3D | |
| mirtk::BSplineFreeFormTransformation3D::Evaluate(double &, double &, double &, int, int, int) const | mirtk::BSplineFreeFormTransformation3D | |
| mirtk::BSplineFreeFormTransformation3D::Evaluate(double &, double &, double &) const | mirtk::BSplineFreeFormTransformation3D | inline |
| EvaluateBCHFormula(int, CPImage &, double, const CPImage &, double, const CPImage &, bool=false) const | mirtk::BSplineFreeFormTransformationSV | protected |
| EvaluateDerivativeOfJacobianWrtDOF(Matrix &, int, double, double) const | mirtk::BSplineFreeFormTransformation3D | inline |
| EvaluateDerivativeOfJacobianWrtDOF(Matrix &, int, double, double, double) const | mirtk::BSplineFreeFormTransformation3D | inline |
| EvaluateHessian(Matrix [3], int, int) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateHessian(Matrix [3], double, double) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateHessian(Matrix [3], int, int, int) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateHessian(Matrix [3], double, double, double) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateInside(double &, double &, double &) const | mirtk::BSplineFreeFormTransformation3D | inline |
| EvaluateJacobian(Matrix &, int, int) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateJacobian(Matrix &, int, int, int) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateJacobian(Matrix &, double, double) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateJacobian(Matrix &, double, double, double) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateJacobianDetDerivative(double dJ[3], const Matrix &adj, double a, double b, double c, bool wrt_world=true, bool use_spacing=true) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateJacobianDetDerivative(double dJ[3], const Matrix &adj, int a, int b, int c, bool wrt_world=true, bool use_spacing=true) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateJacobianDetDerivative(double dJ[3], const Matrix &adj, int i, int j, int k, double x, double y, double z, bool wrt_world=true, bool use_spacing=true) const | mirtk::BSplineFreeFormTransformation3D | inline |
| EvaluateJacobianDetDerivative(double dJ[3], const Matrix &adj, int cp, double x, double y, double z, bool wrt_world=true, bool use_spacing=true) const | mirtk::BSplineFreeFormTransformation3D | inline |
| EvaluateJacobianDOFs(TransformationJacobian &, double, double) const | mirtk::BSplineFreeFormTransformationSV | |
| EvaluateJacobianDOFs(TransformationJacobian &, double, double, double) const | mirtk::BSplineFreeFormTransformationSV | |
| EvaluateJacobianDOFs(TransformationJacobian &, double, double, double, double) const | mirtk::BSplineFreeFormTransformationSV | inline |
| mirtk::BSplineFreeFormTransformation3D::EvaluateJacobianDOFs(double [3], int, int, double, double) const | mirtk::BSplineFreeFormTransformation3D | inline |
| mirtk::BSplineFreeFormTransformation3D::EvaluateJacobianDOFs(double [3], int, int, int, double, double, double) const | mirtk::BSplineFreeFormTransformation3D | inline |
| mirtk::BSplineFreeFormTransformation3D::EvaluateJacobianDOFs(double [3], int, int, int, int, double, double, double, double) const | mirtk::BSplineFreeFormTransformation3D | inline |
| EvaluateJacobianWorld(Matrix &, double, double, double, double) const | mirtk::BSplineFreeFormTransformationSV | inline |
| mirtk::BSplineFreeFormTransformation3D::EvaluateJacobianWorld(Matrix &, double, double) const | mirtk::BSplineFreeFormTransformation3D | inline |
| mirtk::BSplineFreeFormTransformation3D::EvaluateJacobianWorld(Matrix &, double, double, double) const | mirtk::BSplineFreeFormTransformation3D | inline |
| EvaluateLaplacian(double [3], int, int, int) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateLaplacian(double [3], double, double, double) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateLaplacian(double &, double &, double &) const | mirtk::BSplineFreeFormTransformation3D | |
| EvaluateRMSError(const Transformation *) const | mirtk::FreeFormTransformation | |
| mirtk::Transformation::EvaluateRMSError(const ImageAttributes &, const Transformation *) const | mirtk::Transformation | |
| mirtk::Transformation::EvaluateRMSError(const ImageAttributes &, double *, double *) const | mirtk::Transformation | |
| mirtk::Transformation::EvaluateRMSError(const ImageAttributes &, double *, double *, double *) const | mirtk::Transformation | |
| mirtk::Transformation::EvaluateRMSError(const double *, const double *, const double *, double, double *, double *, double *, int no) const | mirtk::Transformation | |
| mirtk::Transformation::EvaluateRMSError(const double *, const double *, const double *, const double *, double *, double *, double *, int no) const | mirtk::Transformation | |
| ExtrapolationMode(enum ExtrapolationMode) | mirtk::FreeFormTransformation | virtual |
| Extrapolator() const | mirtk::FreeFormTransformation | inline |
| FFDJacobianDetDerivative(double dJ[3], const Matrix &adj, int cp, double x, double y, double z, double=0, double=NaN, bool wrt_world=true, bool use_spacing=true) const | mirtk::BSplineFreeFormTransformation3D | inlinevirtual |
| FFDJacobianWorld(Matrix &, double, double, double, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformation3D | inlinevirtual |
| FreeFormTransformation(CPInterpolator &, CPInterpolator *=NULL) | mirtk::FreeFormTransformation | protected |
| FreeFormTransformation(const FreeFormTransformation &, CPInterpolator &, CPInterpolator *=NULL) | mirtk::FreeFormTransformation | protected |
| FreeFormTransformation3D(CPInterpolator &, CPInterpolator *=NULL) | mirtk::FreeFormTransformation3D | protected |
| FreeFormTransformation3D(const FreeFormTransformation3D &, CPInterpolator &, CPInterpolator *=NULL) | mirtk::FreeFormTransformation3D | protected |
| Get(int, Vector &) const | mirtk::FreeFormTransformation | inline |
| Get(int, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| Get(int, int, int, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| Get(int, int, int, int, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| mirtk::Transformation::Get(int) const | mirtk::Transformation | inlinevirtual |
| mirtk::Transformation::Get(DOFValue *) const | mirtk::Transformation | inlinevirtual |
| GetOrientation(double *, double *, double *) const | mirtk::FreeFormTransformation | inline |
| GetSpacing(double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| GetSpacing(double &, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| GetStatus(int, CPStatus &) const | mirtk::FreeFormTransformation | inline |
| GetStatus(int, int, int, DOFStatus &, DOFStatus &, DOFStatus &) const | mirtk::FreeFormTransformation | inline |
| GetStatus(int, int, int, int, DOFStatus &, DOFStatus &, DOFStatus &) const | mirtk::FreeFormTransformation | inline |
| mirtk::Transformation::GetStatus(int) const | mirtk::Transformation | inlinevirtual |
| GetStatusCP(int, int, int, DOFStatus &, DOFStatus &, DOFStatus &) const | mirtk::FreeFormTransformation3D | inline |
| GetT() const | mirtk::FreeFormTransformation | inline |
| GetTAfterSubdivision() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| GetTSpacing() const | mirtk::FreeFormTransformation | inline |
| GetTSpacingAfterSubdivision() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| GetX() const | mirtk::FreeFormTransformation | inline |
| GetXAfterSubdivision() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| GetXSpacing() const | mirtk::FreeFormTransformation | inline |
| GetXSpacingAfterSubdivision() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| GetY() const | mirtk::FreeFormTransformation | inline |
| GetYAfterSubdivision() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| GetYSpacing() const | mirtk::FreeFormTransformation | inline |
| GetYSpacingAfterSubdivision() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| GetZ() const | mirtk::FreeFormTransformation | inline |
| GetZAfterSubdivision() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| GetZSpacing() const | mirtk::FreeFormTransformation | inline |
| GetZSpacingAfterSubdivision() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| GlobalDisplacement(double &, double &, double &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| GlobalHessian(Matrix [3], double, double, double, double=0, double=NaN) const | mirtk::FreeFormTransformation | inlinevirtual |
| GlobalInverse(double &, double &, double &, double=0, double=NaN) const | mirtk::FreeFormTransformation | inlinevirtual |
| GlobalInverseDisplacement(double &, double &, double &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| GlobalJacobian(Matrix &, double, double, double, double=0, double=NaN) const | mirtk::FreeFormTransformation | inlinevirtual |
| mirtk::Transformation::GlobalJacobian(double, double, double, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| GlobalTransform(double &, double &, double &, double=0, double=NaN) const | mirtk::FreeFormTransformation | inlinevirtual |
| HasSameDOFsAs(const Transformation *) const | mirtk::Transformation | inlinevirtual |
| Hessian(Matrix [3], double, double, double, double=0, double=NaN) const | mirtk::FreeFormTransformation | inlinevirtual |
| HessianToWorld(double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| HessianToWorld(double &, double &, double &, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| HessianToWorld(Matrix &) const | mirtk::FreeFormTransformation | inline |
| HessianToWorld(Matrix [3]) const | mirtk::FreeFormTransformation | inline |
| IndexToDOFs(int, int &, int &) const | mirtk::FreeFormTransformation | inline |
| IndexToDOFs(int, int &, int &, int &) const | mirtk::FreeFormTransformation | inline |
| IndexToLattice(int, int &, int &) const | mirtk::FreeFormTransformation | inline |
| IndexToLattice(int, int &, int &, int &) const | mirtk::FreeFormTransformation | inline |
| IndexToLattice(int, int &, int &, int &, int &) const | mirtk::FreeFormTransformation | inline |
| IndexToWorld(int, double &, double &) const | mirtk::FreeFormTransformation | inline |
| IndexToWorld(int, double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| IndexToWorld(int, Point &) const | mirtk::FreeFormTransformation | inline |
| IndexToWorld(int) const | mirtk::FreeFormTransformation | inline |
| Initialize(const ImageAttributes &) | mirtk::BSplineFreeFormTransformationSV | virtual |
| Initialize(const ImageAttributes &, double, double, double, const Transformation *) | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::FreeFormTransformation::Initialize(const ImageAttributes &, double, double, double=-1.0, double=-1.0) | mirtk::FreeFormTransformation | |
| mirtk::FreeFormTransformation::Initialize(const CPImage &, bool=false) | mirtk::FreeFormTransformation | |
| mirtk::FreeFormTransformation::Initialize(const GenericImage< double > &, bool=false) | mirtk::FreeFormTransformation | |
| InitializeCPs(const ImageAttributes &, bool=true) | mirtk::FreeFormTransformation | protected |
| InitializeCPs(const FreeFormTransformation &, bool=true) | mirtk::FreeFormTransformation | protected |
| InitializeDOFs(int) | mirtk::Transformation | protected |
| InitializeDOFs(const Transformation &, int=-1) | mirtk::Transformation | protected |
| InitializeExtrapolator() | mirtk::BSplineFreeFormTransformationSV | protected |
| InitializeInterpolator() | mirtk::FreeFormTransformation | protected |
| InitializeStatus() | mirtk::FreeFormTransformation | protected |
| IntegrateVelocities(double &, double &, double &, double T=1.0) const | mirtk::BSplineFreeFormTransformationSV | |
| Interpolate(const double *, const double *, const double *) | mirtk::BSplineFreeFormTransformationSV | virtual |
| InterpolateVelocities(const double *, const double *, const double *) | mirtk::BSplineFreeFormTransformationSV | virtual |
| Inverse(double &, double &, double &, double=0, double=NaN) const | mirtk::FreeFormTransformation | inlinevirtual |
| mirtk::Transformation::Inverse(Point &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| mirtk::Transformation::Inverse(PointSet &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| InverseDisplacement(GenericImage< double > &, double, double=NaN, const WorldCoordsImage *=NULL) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| InverseDisplacement(GenericImage< float > &, double, double=NaN, const WorldCoordsImage *=NULL) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::BSplineFreeFormTransformation3D::InverseDisplacement(double &, double &, double &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| mirtk::BSplineFreeFormTransformation3D::InverseDisplacement(const ImageAttributes &, double *, double *, double *) const | mirtk::Transformation | virtual |
| mirtk::BSplineFreeFormTransformation3D::InverseDisplacement(GenericImage< double > &, double=NaN, const WorldCoordsImage *=NULL) const | mirtk::Transformation | virtual |
| mirtk::BSplineFreeFormTransformation3D::InverseDisplacement(GenericImage< float > &, double=NaN, const WorldCoordsImage *=NULL) const | mirtk::Transformation | virtual |
| Invert() | mirtk::BSplineFreeFormTransformationSV | virtual |
| IsActive(int) const | mirtk::FreeFormTransformation | inlinevirtual |
| IsActive(int, int, int=0, int=0) const | mirtk::FreeFormTransformation | inlinevirtual |
| IsIdentity() const | mirtk::Transformation | inlinevirtual |
| Jacobian(Matrix &, double, double, double, double=0, double=NaN) const | mirtk::FreeFormTransformation | inlinevirtual |
| mirtk::Transformation::Jacobian(double, double, double, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| JacobianDetDerivative(double dJ[3], const Matrix &adj, int cp, double x, double y, double z, double t=0, double t0=NaN, bool wrt_world=true, bool use_spacing=true) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| JacobianDOFs(Matrix &, int, double, double, double, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| JacobianDOFs(double [3], int, double, double, double, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| JacobianDOFs(TransformationJacobian &, double, double, double, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::BSplineFreeFormTransformation3D::JacobianDOFs(double [3], int, int, int, double, double, double) const | mirtk::BSplineFreeFormTransformation3D | inlinevirtual |
| mirtk::FreeFormTransformation3D::JacobianDOFs(Matrix &, int, int, int, double, double, double) const | mirtk::FreeFormTransformation3D | inlinevirtual |
| JacobianToWorld(double &, double &) const | mirtk::FreeFormTransformation | inline |
| JacobianToWorld(double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| JacobianToWorld(Matrix &) const | mirtk::FreeFormTransformation | inline |
| JacobianToWorldOrientation(double &, double &) const | mirtk::FreeFormTransformation | inline |
| JacobianToWorldOrientation(double &, double &, double &) const | mirtk::FreeFormTransformation | inline |
| KernelRadius() const | mirtk::FreeFormTransformation | inline |
| KernelSize() const | mirtk::BSplineFreeFormTransformation3D | virtual |
| LatticeToIndex(int, int, int=0, int=0) const | mirtk::FreeFormTransformation | inline |
| LatticeToTime(double) const | mirtk::FreeFormTransformation | inlinevirtual |
| LatticeToWorld(double &, double &) const | mirtk::FreeFormTransformation | inlinevirtual |
| LatticeToWorld(double &, double &, double &) const | mirtk::FreeFormTransformation | inlinevirtual |
| LatticeToWorld(Point &) const | mirtk::FreeFormTransformation | inlinevirtual |
| LocalDisplacement(double &, double &, double &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| LocalHessian(Matrix [3], double, double, double, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| LocalInverse(double &, double &, double &, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| LocalInverseDisplacement(double &, double &, double &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| LocalJacobian(Matrix &, double, double, double, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::FreeFormTransformation3D::LocalJacobian(double, double, double, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| LocalTransform(double &, double &, double &, double=0, double=NaN) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::BSplineFreeFormTransformation3D::mirtkPublicAttributeMacro(ParametricGradientType, ParametricGradientCalculation) | mirtk::BSplineFreeFormTransformation3D | protected |
| mirtk::FreeFormTransformation3D::mirtkPublicAttributeMacro(double, SpeedupFactor) | mirtk::FreeFormTransformation | |
| mirtkReadOnlyAttributeMacro(enum ExtrapolationMode, ExtrapolationMode) | mirtk::FreeFormTransformation | |
| MultiBoundingBoxImage(const BaseImage *, int, int &, int &, int &, int &, int &, int &, double=1) const | mirtk::FreeFormTransformation3D | inline |
| NameOfClass() const =0 | mirtk::Object | pure virtual |
| NameOfType() | mirtk::Object | inlinestatic |
| New(TransformationType) | mirtk::Transformation | static |
| New(const Transformation *) | mirtk::Transformation | static |
| New(const char *) | mirtk::Transformation | static |
| NotifyObservers(Event, const void *=NULL) | mirtk::Observable | inline |
| NumberOfActiveCPs() const | mirtk::FreeFormTransformation | inline |
| NumberOfActiveDOFs() const | mirtk::Transformation | inline |
| NumberOfCPs() const | mirtk::FreeFormTransformation | inline |
| NumberOfDOFs() const | mirtk::Transformation | inlinevirtual |
| NumberOfObservers() const | mirtk::Observable | inline |
| NumberOfPassiveCPs() const | mirtk::FreeFormTransformation | inline |
| NumberOfPassiveDOFs() const | mirtk::Transformation | inline |
| NumberOfStepsForIntervalLength(double) const | mirtk::BSplineFreeFormTransformationSV | inlineprotected |
| NumberOfStepsForIntervalLength(double, int) const | mirtk::BSplineFreeFormTransformationSV | inlineprotected |
| Observable() | mirtk::Observable | inlineprotected |
| Observable(const Observable &) | mirtk::Observable | inlineprotected |
| operator=(const Observable &) | mirtk::Observable | inlineprotected |
| Parameter() const | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::Observable::Parameter(const ParameterList &) | mirtk::Object | inline |
| ParametricGradient(const GenericImage< double > *, double *, const WorldCoordsImage *, const WorldCoordsImage *, double, double, double) const | mirtk::BSplineFreeFormTransformationSV | protected |
| ParametricGradient(const GenericImage< double > *, double *, const WorldCoordsImage *, const WorldCoordsImage *, double=-1, double=1) const | mirtk::BSplineFreeFormTransformationSV | inlinevirtual |
| ParametricGradient(const PointSet &, const Vector3D< double > *, double *, double=0, double=-1, double=1) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::Transformation::ParametricGradient(const GenericImage< double > *, double *, const WorldCoordsImage *, double=NaN, double=1) const | mirtk::Transformation | inline |
| mirtk::Transformation::ParametricGradient(const GenericImage< double > *, double *, double=NaN, double=1) const | mirtk::Transformation | inline |
| mirtk::Transformation::ParametricGradient(const GenericImage< double > **, int, double *, const WorldCoordsImage *, const WorldCoordsImage *, const double *=NULL, double=1) const | mirtk::Transformation | inlinevirtual |
| mirtk::Transformation::ParametricGradient(const GenericImage< double > **, int, double *, const WorldCoordsImage *, const double *=NULL, double=1) const | mirtk::Transformation | inline |
| mirtk::Transformation::ParametricGradient(const GenericImage< double > **, int, double *, const double *=NULL, double=1) const | mirtk::Transformation | inline |
| ParametricGradientType enum name | mirtk::BSplineFreeFormTransformation3D | |
| PG_Analytic enum value | mirtk::BSplineFreeFormTransformation3D | |
| PG_Approximation enum value | mirtk::BSplineFreeFormTransformation3D | |
| PG_Convolution enum value | mirtk::BSplineFreeFormTransformation3D | |
| PG_Default enum value | mirtk::BSplineFreeFormTransformation3D | |
| Print(ostream &, Indent=0) const | mirtk::BSplineFreeFormTransformationSV | virtual |
| mirtk::Transformation::Print(Indent=0) const | mirtk::Transformation | inline |
| Put(int, const Vector &) | mirtk::FreeFormTransformation | inline |
| Put(int, double, double, double) | mirtk::FreeFormTransformation | inline |
| Put(int, int, int, double, double, double) | mirtk::FreeFormTransformation | inline |
| Put(int, int, int, int, double, double, double) | mirtk::FreeFormTransformation | inline |
| mirtk::Transformation::Put(int, double) | mirtk::Transformation | inlinevirtual |
| mirtk::Transformation::Put(const DOFValue *) | mirtk::Transformation | inlinevirtual |
| PutBoundingBox(double, double, double, double, double, double) | mirtk::FreeFormTransformation | |
| PutBoundingBox(const Point &, const Point &) | mirtk::FreeFormTransformation | |
| PutBoundingBox(double, double) | mirtk::FreeFormTransformation | |
| PutBoundingBox(double, double, double, double, double, double, double, double) | mirtk::FreeFormTransformation | |
| PutOrientation(double *, double *, double *) | mirtk::FreeFormTransformation | inline |
| PutStatus(int, const CPStatus &) | mirtk::FreeFormTransformation | inline |
| PutStatus(int, int, int, DOFStatus, DOFStatus, DOFStatus) | mirtk::FreeFormTransformation | inline |
| PutStatus(int, int, int, int, DOFStatus, DOFStatus, DOFStatus) | mirtk::FreeFormTransformation | inline |
| mirtk::Transformation::PutStatus(int, DOFStatus) | mirtk::Transformation | inlinevirtual |
| PutStatusCP(int, int, int, DOFStatus, DOFStatus, DOFStatus) | mirtk::FreeFormTransformation3D | inline |
| Read(const char *) | mirtk::Transformation | virtual |
| Read(Cifstream &) | mirtk::Transformation | virtual |
| ReadDOFs(Cifstream &, TransformationType) | mirtk::BSplineFreeFormTransformationSV | protectedvirtual |
| RequiresCachingOfDisplacements() const | mirtk::BSplineFreeFormTransformationSV | inlinevirtual |
| Reset() | mirtk::Transformation | virtual |
| ScaleVelocities(double) | mirtk::BSplineFreeFormTransformationSV | |
| ScalingAndSquaring(GenericImage< VoxelType > *d, double T=1.0, const WorldCoordsImage *wc=NULL) const | mirtk::BSplineFreeFormTransformationSV | |
| ScalingAndSquaring(const ImageAttributes &attr, GenericImage< VoxelType > *d, GenericImage< VoxelType > *dx, GenericImage< VoxelType > *dj=NULL, GenericImage< VoxelType > *lj=NULL, double T=1.0, const WorldCoordsImage *wc=NULL) const | mirtk::BSplineFreeFormTransformationSV | |
| Set(const char *, const char *) | mirtk::BSplineFreeFormTransformationSV | virtual |
| StepLengthForIntervalLength(double) const | mirtk::BSplineFreeFormTransformationSV | inlineprotected |
| Subdivide(bool=true, bool=true, bool=true, bool=true) | mirtk::BSplineFreeFormTransformationSV | virtual |
| Subdivide2D() | mirtk::FreeFormTransformation | inline |
| Subdivide3D() | mirtk::FreeFormTransformation | inline |
| Subdivide4D() | mirtk::FreeFormTransformation | inline |
| T() const | mirtk::FreeFormTransformation | inline |
| Throw(ErrorType err, const char *func, Args... args) const | mirtk::Object | protected |
| ThrowStatic(ErrorType err, const char *cls, const char *func, Args... args) | mirtk::Object | protectedstatic |
| TimeToLattice(double) const | mirtk::FreeFormTransformation | inlinevirtual |
| Transform(double &, double &, double &, double=0, double=NaN) const | mirtk::FreeFormTransformation | inlinevirtual |
| mirtk::Transformation::Transform(Point &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| mirtk::Transformation::Transform(PointSet &, double=0, double=NaN) const | mirtk::Transformation | inlinevirtual |
| mirtk::Transformation::Transform(int, double *, double *, double *, double=0, double=NaN) const | mirtk::Transformation | virtual |
| mirtk::Transformation::Transform(int, double *, double *, double *, const double *, double=NaN) const | mirtk::Transformation | virtual |
| mirtk::Transformation::Transform(WorldCoordsImage &, double=NaN) const | mirtk::Transformation | virtual |
| Transformation(int=0) | mirtk::Transformation | protected |
| Transformation(const Transformation &) | mirtk::Transformation | protected |
| Transformation(const Transformation &, int) | mirtk::Transformation | protected |
| TypeOfClass(const char *) | mirtk::Transformation | static |
| TypeOfClass() const | mirtk::Transformation | inlinevirtual |
| Update(const DOFValue *) | mirtk::Transformation | inlinevirtual |
| UpperIntegrationLimit(double t, double t0) const | mirtk::BSplineFreeFormTransformationSV | inline |
| Vector typedef | mirtk::FreeFormTransformation | |
| Velocity(GenericImage< float > &) const | mirtk::BSplineFreeFormTransformationSV | inline |
| Velocity(GenericImage< double > &) const | mirtk::BSplineFreeFormTransformationSV | inline |
| Verify() | mirtk::Transformation | virtual |
| WorldToLattice(double &, double &) const | mirtk::FreeFormTransformation | inlinevirtual |
| WorldToLattice(double &, double &, double &) const | mirtk::FreeFormTransformation | inlinevirtual |
| WorldToLattice(Point &) const | mirtk::FreeFormTransformation | inlinevirtual |
| Write(const char *) const | mirtk::Transformation | virtual |
| Write(Cofstream &) const | mirtk::Transformation | virtual |
| WriteCPs(Cofstream &) const | mirtk::FreeFormTransformation | protected |
| WriteDOFs(Cofstream &) const | mirtk::BSplineFreeFormTransformationSV | protectedvirtual |
| X() const | mirtk::FreeFormTransformation | inline |
| Y() const | mirtk::FreeFormTransformation | inline |
| Z() const | mirtk::FreeFormTransformation | inline |
| ~BSplineFreeFormTransformation3D() | mirtk::BSplineFreeFormTransformation3D | virtual |
| ~BSplineFreeFormTransformationSV() | mirtk::BSplineFreeFormTransformationSV | virtual |
| ~FreeFormTransformation() | mirtk::FreeFormTransformation | virtual |
| ~FreeFormTransformation3D() | mirtk::FreeFormTransformation3D | virtual |
| ~Object() | mirtk::Object | inlinevirtual |
| ~Observable() | mirtk::Observable | inlinevirtual |
| ~Transformation() | mirtk::Transformation | virtual |