| Packages/Deformable/CMakeFiles/deformable_pythonlib.dir/install/mirtk/deformable/__init__.py | |
| Packages/Scripting/CMakeFiles/scripting_pythonlib.dir/install/mirtk/rendering/__init__.py | |
| Applications/CMakeFiles/pythonlib.dir/install/mirtk/__init__.py | |
| Applications/CMakeFiles/pythonlib.dir/install/mirtk/atlas/__init__.py | |
| Applications/CMakeFiles/pythonlib.dir/install/mirtk/batch/__init__.py | |
| AdaptiveLineSearch.h | |
| AffineTransformation.h | |
| Algorithm.h | |
| Allocate.h | |
| Arith.h | |
| Arpack.h | Interface to ARPACK FORTRAN routines |
| Array.h | |
| ArrayHeap.h | Imports the STL functions for Array heap operations into the mirtk namespace |
| AsConformalAsPossibleMapper.h | |
| Assert.h | |
| AuthalicSurfaceMapper.h | |
| BalloonForce.h | |
| BaseImage.h | |
| BasisProject.cmake | |
| BasisScriptConfig.cmake | |
| BiasCorrection.h | |
| BiasField.h | |
| BinaryVoxelFunction.h | |
| BoundaryMapper.h | |
| BoundarySegment.h | |
| BoundarySegmentMapper.h | |
| BoundarySegmentParameterizer.h | |
| BoundaryToDiskMapper.h | |
| BoundaryToPolygonMapper.h | |
| BoundaryToSquareMapper.h | |
| BrentLineSearch.h | |
| BSpline.h | |
| BSplineBiasField.h | |
| BSplineFreeFormTransformation3D.h | |
| BSplineFreeFormTransformation4D.h | |
| BSplineFreeFormTransformationStatistical.h | |
| BSplineFreeFormTransformationSV.h | |
| BSplineFreeFormTransformationTD.h | |
| BSplineInterpolateImageFunction.h | |
| BSplineInterpolateImageFunction.hxx | |
| BSplineInterpolateImageFunction2D.h | |
| BSplineInterpolateImageFunction2D.hxx | |
| BSplineInterpolateImageFunction3D.h | |
| BSplineInterpolateImageFunction3D.hxx | |
| BSplineInterpolateImageFunction4D.h | |
| BSplineInterpolateImageFunction4D.hxx | |
| CellDataFilter.h | |
| Cfstream.h | |
| CharbonnierErrorFunction.h | |
| ChordLengthBoundarySegmentParameterizer.h | |
| ChordLengthSurfaceMapper.h | |
| Cifstream.h | |
| CityBlockDistanceTransform.h | |
| CloseCellData.h | |
| ClosePointData.h | |
| ClosestCell.h | |
| ClosestPoint.h | |
| ClosestPointLabel.h | |
| Closing.h | |
| Cofstream.h | |
| Common.h | |
| CommonConfig.h | |
| CommonExport.h | |
| batch/condor.py | |
| condor.py | |
| Config.h | |
| ConfigSettings.cmake | |
| Configurable.h | |
| ConformalSurfaceFlattening.h | |
| ConjugateGradientDescent.h | |
| ConnectedComponents.h | |
| ConstExtrapolateImageFunction.h | |
| ConstExtrapolateImageFunctionWithPeriodicTime.h | |
| ConstGenericImageIterator.h | |
| ConstImageIterator.h | |
| ConstraintMeasure.h | |
| ConvolutionFunction.h | |
| CosineOfNormalizedGradientField.h | |
| CSplineInterpolateImageFunction.h | |
| CSplineInterpolateImageFunction.hxx | |
| CSplineInterpolateImageFunction2D.h | |
| CSplineInterpolateImageFunction2D.hxx | |
| CSplineInterpolateImageFunction3D.h | |
| CSplineInterpolateImageFunction3D.hxx | |
| CSplineInterpolateImageFunction4D.h | |
| CSplineInterpolateImageFunction4D.hxx | |
| CubicBSplineConvolution.h | |
| CubicBSplineInterpolateImageFunction.h | |
| CubicBSplineInterpolateImageFunction.hxx | |
| CubicBSplineInterpolateImageFunction2D.h | |
| CubicBSplineInterpolateImageFunction2D.hxx | |
| CubicBSplineInterpolateImageFunction3D.h | |
| CubicBSplineInterpolateImageFunction3D.hxx | |
| CubicBSplineInterpolateImageFunction4D.h | |
| CubicBSplineInterpolateImageFunction4D.hxx | |
| Cuda.h | |
| CudaRuntime.h | |
| CurrentsDistance.h | |
| CurvatureConstraint.h | |
| CutilMath.h | |
| DataFidelity.h | |
| DataFunctions.h | |
| DataOp.h | Defines base class and I/O functions for arbitrary 1D data sequences |
| DataSelection.h | |
| DataStatistics.h | |
| Deallocate.h | |
| DeformableConfig.h | |
| DeformableExport.h | |
| DeformableSurfaceDebugger.h | |
| DeformableSurfaceLogger.h | |
| DeformableSurfaceModel.h | |
| Depends.cmake | |
| DifferenceOfCompositionLieBracketImageFilter3D.h | |
| DilateCellData.h | |
| DilatePointData.h | |
| Dilation.h | |
| Directories.cmake | |
| DisplacementFieldExp.h | |
| DisplacementToVelocityField.h | |
| DisplacementToVelocityFieldBCH.h | |
| DistanceErrorFunction.h | |
| Downsampling.h | |
| DrawEM.h | |
| DrawEMExport.h | |
| EdgeConnectivity.h | |
| EdgeTable.h | |
| Eigen.h | Interface to Eigen3 library |
| EMBase.h | |
| EnergyMeasure.h | |
| EnergyTerm.h | |
| EnergyThreshold.h | |
| ErodeCellData.h | |
| ErodePointData.h | |
| Erosion.h | |
| EuclideanDistanceTransform.h | |
| EulerMethod.h | |
| EulerMethodWithDamping.h | |
| EulerMethodWithMomentum.h | |
| Event.h | |
| EventDelegate.h | |
| Exception.h | |
| ExternalForce.h | |
| ExternalForceTerm.h | |
| ExtrapolateImageFunction.h | |
| ExtrapolationMode.h | |
| FastCubicBSplineInterpolateImageFunction.h | |
| FastCubicBSplineInterpolateImageFunction.hxx | |
| FastCubicBSplineInterpolateImageFunction2D.h | |
| FastCubicBSplineInterpolateImageFunction2D.hxx | |
| FastCubicBSplineInterpolateImageFunction3D.h | |
| FastCubicBSplineInterpolateImageFunction3D.hxx | |
| FastCubicBSplineInterpolateImageFunction4D.h | |
| FastCubicBSplineInterpolateImageFunction4D.hxx | |
| FastDelegate.h | |
| FastLinearImageGradientFunction.h | |
| FastLinearImageGradientFunction.hxx | |
| FastLinearImageGradientFunction2D.h | |
| FastLinearImageGradientFunction2D.hxx | |
| FastLinearImageGradientFunction3D.h | |
| FastLinearImageGradientFunction3D.hxx | |
| FFDIntegrationMethod.h | |
| FiducialMatch.h | |
| FiducialRegistrationError.h | |
| FixedBoundarySurfaceMapper.h | |
| FluidFreeFormTransformation.h | |
| ForEachBinaryVoxelFunction.h | |
| ForEachNonaryVoxelFunction.h | |
| ForEachOctaryVoxelFunction.h | |
| ForEachQuaternaryVoxelFunction.h | |
| ForEachQuinaryVoxelFunction.h | |
| ForEachSenaryVoxelFunction.h | |
| ForEachSeptenaryVoxelFunction.h | |
| ForEachTernaryVoxelFunction.h | |
| ForEachUnaryVoxelFunction.h | |
| ForEachVoxelFunction.py | |
| FreeBoundarySurfaceMapper.h | |
| FreeFormTransformation.h | |
| FreeFormTransformation3D.h | |
| FreeFormTransformation4D.h | |
| FreeFormTransformationIntegration.h | |
| FreeFormTransformationRungeKutta.h | |
| FuzzyCorrespondence.h | |
| FuzzyCorrespondenceUtils.h | |
| GaussCurvatureConstraint.h | |
| Gaussian.h | |
| GaussianBlurring.h | |
| GaussianBlurring2D.h | |
| GaussianBlurring4D.h | |
| GaussianBlurringWithPadding.h | |
| GaussianBlurringWithPadding2D.h | |
| GaussianErrorFunction.h | |
| GaussianInterpolateImageFunction.h | |
| GaussianInterpolateImageFunction.hxx | |
| GaussianInterpolateImageFunction2D.h | |
| GaussianInterpolateImageFunction2D.hxx | |
| GaussianInterpolateImageFunction3D.h | |
| GaussianInterpolateImageFunction3D.hxx | |
| GaussianInterpolateImageFunction4D.h | |
| GaussianInterpolateImageFunction4D.hxx | |
| GaussianPyramidFilter.h | |
| GenericImage.h | |
| GenericImageIterator.h | |
| GenericRegistrationDebugger.h | |
| GenericRegistrationFilter.h | |
| GenericRegistrationLogger.h | |
| GIPL.h | |
| GIPLImageReader.h | |
| GIPLImageWriter.h | |
| GradientDescent.h | |
| GradientFieldSimilarity.h | |
| GradientImageFilter.h | |
| HarmonicSurfaceMapper.h | |
| HarmonicTetrahedralMeshMapper.h | |
| HashImage.h | |
| HashImage.hxx | |
| HashProbabilisticAtlas.h | |
| HessianImageFilter.h | |
| Histogram1D.h | |
| Histogram2D.h | |
| HistogramImageSimilarity.h | |
| HistogramMatching.h | |
| HomogeneousTransformation.h | |
| HomogeneousTransformationIterator.h | |
| Image.h | |
| ImageAttributes.h | |
| ImageConfig.h | |
| ImageCovariance.h | |
| ImageEdgeDistance.h | |
| ImageEdgeForce.h | |
| ImageExport.h | |
| ImageFunction.h | |
| ImageGradientFunction.h | |
| ImageGradientFunction.hxx | |
| ImageHistogram1D.h | |
| ImageIterator.h | |
| ImageReader.h | |
| ImageReaderFactory.h | |
| ImageRegion.h | |
| ImageSequence.h | |
| ImageSequence.hh | |
| ImageSimilarity.h | |
| ImageSurfaceStatistics.h | |
| ImageToImage.h | |
| ImageToInterpolationCoefficients.h | |
| ImageTransformation.h | |
| ImageWriter.h | |
| ImageWriterFactory.h | |
| ImplicitSurfaceDistance.h | |
| ImplicitSurfaceForce.h | |
| ImplicitSurfaceUtils.h | |
| Indent.h | |
| InexactLineSearch.h | |
| InflationForce.h | |
| InflationStoppingCriterion.h | |
| IntensityCorrelationRatioXY.h | |
| IntensityCorrelationRatioYX.h | |
| IntensityCrossCorrelation.h | |
| InternalForce.h | |
| InternalForceTerm.h | |
| InterpolateImageFunction.h | |
| InterpolateImageFunction.hxx | |
| InterpolationMode.h | |
| IntrinsicLeastAreaDistortionSurfaceMapper.h | |
| IntrinsicLeastEdgeLengthDistortionSurfaceMapper.h | |
| IntrinsicSurfaceMapper.h | |
| InverseAffineTransformation.h | |
| IOConfig.h | |
| IOExport.h | |
| JacobianConstraint.h | |
| JointImageEntropy.h | |
| KMeans.h | |
| LabelConsistency.h | |
| LeastSquaresConformalSurfaceMapper.h | |
| LieBracketImageFilter.h | |
| LieBracketImageFilter2D.h | |
| LieBracketImageFilter3D.h | |
| LimitedMemoryBFGSDescent.h | |
| LinearElasticityConstraint.h | |
| LinearFixedBoundarySurfaceMapper.h | |
| LinearFreeFormTransformation3D.h | |
| LinearFreeFormTransformation4D.h | |
| LinearFreeFormTransformationTD.h | |
| LinearImageGradientFunction.h | |
| LinearImageGradientFunction.hxx | |
| LinearImageGradientFunction2D.h | |
| LinearImageGradientFunction2D.hxx | |
| LinearImageGradientFunction3D.h | |
| LinearImageGradientFunction3D.hxx | |
| LinearInterpolateImageFunction.h | |
| LinearInterpolateImageFunction.hxx | |
| LinearInterpolateImageFunction2D.h | |
| LinearInterpolateImageFunction2D.hxx | |
| LinearInterpolateImageFunction3D.h | |
| LinearInterpolateImageFunction3D.hxx | |
| LinearInterpolateImageFunction4D.h | |
| LinearInterpolateImageFunction4D.hxx | |
| LinearTetrahedralMeshMapper.h | |
| LineSearch.h | |
| List.h | |
| LocalOptimizer.h | |
| LogJacobianConstraint.h | |
| Mapping.h | |
| MappingExport.h | |
| Math.h | |
| Matlab.h | |
| Matrix.h | |
| Matrix3x3.h | |
| MaximumCurvatureConstraint.h | |
| MaxStepLineSearch.h | |
| MeanCurvatureConstraint.h | |
| MeanShift.h | |
| MeanSquaredDisplacementError.h | |
| MeanValueSurfaceMapper.h | |
| MedianPointData.h | |
| Memory.h | |
| MeshFilter.h | |
| MeshlessBiharmonicMap.h | |
| MeshlessHarmonicMap.h | |
| MeshlessHarmonicVolumeMapper.h | |
| MeshlessMap.h | |
| MeshlessVolumeMapper.h | |
| MeshSmoothing.h | |
| MetricDistortion.h | |
| MinActiveStoppingCriterion.h | |
| MirrorExtrapolateImageFunction.h | |
| MIRTKConfig.cmake | |
| MIRTKConfigVersion.cmake | |
| MIRTKUse.cmake | |
| MultiLevelFreeFormTransformation.h | |
| MultiLevelStationaryVelocityTransformation.h | |
| MultiLevelTransformation.h | |
| MultipleVoxelTransformation.h | |
| MutualImageInformation.h | |
| NaryVoxelFunction.h | |
| NearestNeighborExtrapolateImageFunction.h | |
| NearestNeighborInterpolateImageFunction.h | |
| NearestNeighborInterpolateImageFunction.hxx | |
| NearOptimalIntrinsicSurfaceMapper.h | |
| NegJacobianConstraint.h | |
| NeighborhoodOffsets.h | |
| neonatal_cortex.py | |
| NiftiImage.h | |
| NiftiImageInfo.h | |
| NiftiImageReader.h | |
| NiftiImageWriter.h | |
| NonSelfIntersectionConstraint.h | |
| NonSymmetricWeightsSurfaceMapper.h | |
| NormalForce.h | |
| NormalizedGradientFieldSimilarity.h | |
| NormalizedIntensityCrossCorrelation.h | |
| NormalizedMutualImageInformation.h | |
| NormalizeNyul.h | |
| Numeric.h | |
| Numerics.h | |
| NumericsConfig.h | |
| NumericsExport.h | |
| Object.h | |
| ObjectFactory.h | |
| ObjectiveFunction.h | |
| Observable.h | |
| Observer.h | |
| OpenCellData.h | |
| OpenPointData.h | |
| OptimizationMethod.h | |
| Options.h | |
| OrderedMap.h | |
| OrderedSet.h | |
| Pair.h | |
| Parallel.h | |
| PartialAffineTransformation.h | |
| PartialBSplineFreeFormTransformationSV.h | |
| PartialMultiLevelStationaryVelocityTransformation.h | |
| Path.h | |
| PeakSignalToNoiseRatio.h | |
| PeronaMalikErrorFunction.h | |
| PGM.h | |
| PGMImageReader.h | |
| PGMImageWriter.h | |
| PiecewiseLinearMap.h | |
| Plane.h | |
| PNGImageWriter.h | |
| Point.h | |
| PointCorrespondence.h | |
| PointCorrespondenceDistance.h | |
| PointDataFilter.h | |
| PointLocator.h | |
| PointSamples.h | |
| PointSet.h | |
| PointSetDistance.h | |
| PointSetDistanceMeasure.h | |
| PointSetExport.h | |
| PointSetForce.h | |
| PointSetIO.h | |
| PointSetUtils.h | |
| Polyhedron.h | |
| Polynomial.h | |
| PolynomialBiasField.h | |
| PolynomialSolvers.h | |
| PriorityQueue.h | |
| ProbabilisticAtlas.h | |
| Profiling.h | |
| ProjectSettings.cmake | |
| QuadraticCurvatureConstraint.h | |
| Queue.h | |
| RadialErrorFunction.h | |
| Random.h | |
| RegisteredImage.h | |
| RegisteredPointSet.h | |
| RegisteredSurface.h | |
| Registration.h | |
| RegistrationConfig.h | |
| RegistrationEnergy.h | |
| RegistrationEnergyParser.h | |
| RegistrationExport.h | |
| RegistrationFilter.h | |
| RepeatExtrapolateImageFunction.h | |
| RepulsiveForce.h | |
| Resampling.h | |
| ResamplingWithPadding.h | |
| RigidTransformation.h | |
| RobustClosestPoint.h | |
| RobustPointMatch.h | |
| ScalarFunction.h | |
| ScalarFunctionToImage.h | |
| ScalarGaussian.h | |
| ScalingAndSquaring.h | |
| screenshots.py | |
| SeparableConvolution.h | |
| Settings.cmake | |
| ShapeBasedInterpolateImageFunction.h | |
| ShapePreservingSurfaceMapper.h | |
| SimilarityMeasure.h | |
| SimilarityTransformation.h | |
| Sinc.h | |
| SincInterpolateImageFunction.h | |
| SincInterpolateImageFunction.hxx | |
| SincInterpolateImageFunction2D.h | |
| SincInterpolateImageFunction2D.hxx | |
| SincInterpolateImageFunction3D.h | |
| SincInterpolateImageFunction3D.hxx | |
| SincInterpolateImageFunction4D.h | |
| SincInterpolateImageFunction4D.hxx | |
| batch/slurm.py | |
| slurm.py | |
| SmoothnessConstraint.h | |
| SparseMatrix.h | |
| SparsityConstraint.h | |
| spatiotemporal.py | |
| SpectralConformalSurfaceMapper.h | |
| SpectralDecomposition.h | |
| SpectralMatch.h | |
| SphericalSurfaceMapper.h | |
| SpringForce.h | |
| SquaredErrorFunction.h | |
| Stack.h | |
| Status.h | |
| StoppingCriterion.h | |
| Stream.h | |
| StretchingForce.h | |
| String.h | |
| Stripper.h | |
| SubdividedBoundarySegmentParameterizer.h | |
| subprocess.py | |
| SumOfSquaredIntensityDifferences.h | |
| SurfaceBoundary.h | |
| SurfaceCollisions.h | |
| SurfaceConstraint.h | |
| SurfaceCurvature.h | |
| SurfaceDistance.h | |
| SurfaceFilter.h | |
| SurfaceForce.h | |
| SurfaceMapper.h | |
| SurfacePatches.h | |
| SurfaceRemeshing.h | |
| SymmetricWeightsSurfaceMapper.h | |
| System.h | |
| Terminal.h | |
| TernaryVoxelFunction.h | |
| TestProd.h | |
| TetrahedralMeshMapper.h | |
| TopologyPreservationConstraint.h | |
| Transformation.h | |
| TransformationApproximationError.h | |
| TransformationConfig.h | |
| TransformationConstraint.h | |
| TransformationExport.h | |
| TransformationJacobian.h | |
| TransformationModel.h | |
| Transformations.h | |
| TransformationType.h | |
| TransformationUtils.h | |
| Triangle.h | |
| triangle_triangle_intersection.h | |
| Umfpack.h | Interface to UMFPACK routines |
| UnaryVoxelFunction.h | |
| UniformBoundarySegmentParameterizer.h | |
| UniformSurfaceMapper.h | |
| UnorderedMap.h | |
| UnorderedSet.h | |
| Utils.h | Collection of a few very basic functions |
| utils.py | |
| Vector.h | |
| Vector3.h | |
| Vector3D.h | |
| Vector4D.h | |
| VectorND.h | |
| VelocityFieldExp.h | |
| VelocityToDisplacementField.h | |
| VelocityToDisplacementFieldEuler.h | |
| VelocityToDisplacementFieldSS.h | |
| Version.h | |
| VersionInfo.h | |
| VolumeMapper.h | |
| VolumePreservationConstraint.h | |
| Voxel.h | |
| VoxelCast.h | |
| VoxelDomain.h | |
| VoxelFunction.h | |
| Vtk.h | |
| VtkMath.h | |