#include <ClosestPointLabel.h>
Inheritance diagram for mirtk::ClosestPointLabel:
Collaboration diagram for mirtk::ClosestPointLabel:
Public Member Functions | |
| ClosestPointLabel () | |
| Constructor. | |
| ClosestPointLabel (const ClosestPointLabel &) | |
| Copy constructor. | |
| virtual void | Initialize () |
| Initialize correspondence map after input and parameters are set. | |
| virtual PointCorrespondence * | NewInstance () const |
| Copy construct a new instance. | |
| virtual void | Reinitialize () |
| Reinitialize correspondence map after change of input topology. | |
| virtual TypeId | Type () const |
| Type enumeration value. | |
| virtual void | Update () |
| Update correspondence map. | |
| virtual | ~ClosestPointLabel () |
| Destructor. | |
 Public Member Functions inherited from mirtk::ClosestPoint | |
| ClosestPoint () | |
| Constructor. | |
| ClosestPoint (const ClosestPoint &) | |
| Copy constructor. | |
| virtual bool | GetInputSourcePoint (int, Point &) const |
| Get untransformed source point corresponding to i-th target (sample) point. | |
| virtual bool | GetInputTargetPoint (int, Point &) const |
| Get untransformed target point corresponding to i-th source (sample) point. | |
| virtual int | GetSourceIndex (int) const |
| virtual bool | GetSourcePoint (int, Point &) const |
| Get (transformed) source point corresponding to i-th target (sample) point. | |
| virtual int | GetTargetIndex (int) const |
| virtual bool | GetTargetPoint (int, Point &) const |
| Get (transformed) target point corresponding to i-th source (sample) point. | |
| virtual ParameterList | Parameter () const |
| Get parameter key/value as string map. | |
| virtual bool | Set (const char *, const char *) |
| Set parameter value from string. | |
| virtual bool | Upgrade () |
| Update correspondence map after convergence. | |
| virtual | ~ClosestPoint () |
| Destructor. | |
| Public Member Functions inherited from mirtk::PointCorrespondence | |
| bool | AddFeature (const char *name, double weight=1.0, double slope=1.0, double intercept=.0) |
| int | GetIndex (int) const |
| bool | GetInputPoint (int, Point &) const |
| Get untransformed output point corresponding to i-th input (sample) point. | |
| bool | GetPoint (int, Point &) const |
| Get (transformed) output point corresponding to i-th input (sample) point. | |
| void | RemoveFeature (const char *name) |
| virtual void | WriteDataSets (const char *, const char *, bool=true) const |
| Write input of data fidelity term. | |
| virtual void | WriteSpectralPoints (const char *, vtkPointSet *) const |
| Write first three spectral coordinates as polydata points. | |
| virtual | ~PointCorrespondence () |
| Destructor. | |
| Public Member Functions inherited from mirtk::Observable | |
| void | AddObserver (Observer &) |
| Add observer. | |
| void | Broadcast (Event, const void *=NULL) |
| Broadcast event to observers. | |
| void | ClearObservers () |
| Delete all observers. | |
| void | DeleteObserver (Observer &) |
| Delete observer. | |
| void | NotifyObservers (Event, const void *=NULL) |
| Notify all observers about given event if this object has changed. | |
| int | NumberOfObservers () const |
| Number of current observers. | |
| virtual | ~Observable () |
| Destructor. | |
| Public Member Functions inherited from mirtk::Object | |
| virtual const char * | NameOfClass () const =0 |
| Get name of class, which this object is an instance of. | |
| bool | Parameter (const ParameterList &) |
| Set parameters from name/value pairs. | |
| virtual | ~Object () |
| Destructor. | |
Protected Member Functions | |
| void | Init () |
| Protected Member Functions inherited from mirtk::ClosestPoint | |
| mirtkAttributeMacro (double, MaxSquaredDistance) | |
| Maximum squared distance. | |
| mirtkAttributeMacro (Array< int >, TargetIndex) | |
| Indices of target points corresponding to the respective source points. | |
| mirtkAttributeMacro (Array< double >, TargetDistance) | |
| Distance of closest target points from source samples. | |
| mirtkAttributeMacro (Array< int >, SourceIndex) | |
| Indices of source points corresponding to the respective target points. | |
| mirtkAttributeMacro (Array< double >, SourceDistance) | |
| Distance of closest source points from target samples. | |
| mirtkPublicAttributeMacro (double, Sigma) | |
| mirtkPublicAttributeMacro (double, MaxDistance) | |
| Protected Member Functions inherited from mirtk::PointCorrespondence | |
| void | CompleteFeatureInfo (const RegisteredPointSet *, FeatureList &) |
| void | Init () |
| mirtkAttributeMacro (int, M) | |
| Number of point (samples) in target data set. | |
| mirtkAttributeMacro (int, N) | |
| Number of point (samples) in source data set. | |
| mirtkAttributeMacro (Vector, TargetEigenvalues) | |
| Eigenvalues corresponding to spectral coordinates of target. | |
| mirtkAttributeMacro (Vector, SourceEigenvalues) | |
| Eigenvalues corresponding to spectral coordinates of source. | |
| mirtkPublicAggregateMacro (const RegisteredPointSet, Target) | |
| (Transformed) target data set | |
| mirtkPublicAggregateMacro (const Array< int >, TargetSample) | |
| Indices of target point samples or NULL if all points are considered. | |
| mirtkPublicAggregateMacro (const RegisteredPointSet, Source) | |
| (Transformed) source data set | |
| mirtkPublicAggregateMacro (const Array< int >, SourceSample) | |
| Indices of source point samples or NULL if all points are considered. | |
| mirtkPublicAttributeMacro (FeatureList, TargetFeatures) | |
| Indices and rescaling parameters of target point features. | |
| mirtkPublicAttributeMacro (FeatureList, SourceFeatures) | |
| Indices and rescaling parameters of source point features. | |
| mirtkPublicAttributeMacro (int, DimensionOfSpectralPoints) | |
| Number of eigenmodes used for spectral features if used. | |
| mirtkPublicAttributeMacro (bool, DiffeomorphicSpectralDecomposition) | |
| Whether to use diffeomorphic spectral matching for spectral decomposition. | |
| mirtkPublicAttributeMacro (bool, UpdateSpectralPoints) | |
| Whether to update spectral coordinates of moving dataset. | |
| mirtkPublicAttributeMacro (bool, FromTargetToSource) | |
| Whether target to source correspondences are needed (i.e., GetSourcePoint) | |
| mirtkPublicAttributeMacro (bool, FromSourceToTarget) | |
| Whether source to target correspondences are needed (i.e., GetTargetPoint) | |
| mirtkPublicAttributeMacro (Direction, DefaultDirection) | |
| Default direction (i.e., GetPoint) | |
| mirtkReadOnlyAttributeMacro (int, NumberOfFeatures) | |
| Dimension of feature vectors. | |
| PointCorrespondence (const RegisteredPointSet *=NULL, const RegisteredPointSet *=NULL) | |
| Constructor. | |
| PointCorrespondence (const PointCorrespondence &) | |
| Copy constructor. | |
| Protected Member Functions inherited from mirtk::Observable | |
| Observable () | |
| Default constructor. | |
| Observable (const Observable &) | |
| Copy constructor. | |
| Observable & | operator= (const Observable &) |
| Assignment operator. | |
| Protected Member Functions inherited from mirtk::Object | |
| template<typename... Args> | |
| void | Throw (ErrorType err, const char *func, Args... args) const |
Additional Inherited Members | |
| Public Types inherited from mirtk::PointCorrespondence | |
| enum | Direction |
| Enumeration of correspondence mapping direction. | |
| typedef PointLocator::FeatureInfo | FeatureInfo |
| Info structure of point feature to use for point matching. | |
| typedef PointLocator::FeatureList | FeatureList |
| List of point features to use for point matching. | |
| enum | TypeId { Unknown, FiducialMatch, ClosestPoint, ClosestPointLabel, ClosestCell, SpectralMatch, RobustClosestPoint, RobustPointMatch } |
| Enumeration of available point correspondence maps. More... | |
| Static Public Member Functions inherited from mirtk::PointCorrespondence | |
| static double | Distance2BetweenPoints (const double *a, const double *b, int d=3) |
| static int | GetNumberOfPoints (vtkPointSet *dataset, const Array< int > *sample=NULL) |
| static int | GetNumberOfPoints (const RegisteredPointSet *dataset, const Array< int > *sample=NULL) |
| static void | GetPoint (Point &point, vtkPointSet *dataset, const Array< int > *sample, int index) |
| static void | GetPoint (Point &point, const RegisteredPointSet *dataset, const Array< int > *sample, int index) |
| static void | GetPoint (double *point, vtkPointSet *dataset, const Array< int > *sample, int index, const FeatureList *feature=NULL) |
| static void | GetPoint (double *point, const RegisteredPointSet *dataset, const Array< int > *sample, int index, const FeatureList *feature=NULL) |
| static int | GetPointDataIndexByCaseInsensitiveName (vtkPointData *, const string &) |
| Get index of point data array using case insensitive name. | |
| static int | GetPointDimension (vtkPointSet *dataset, const FeatureList *feature) |
| static int | GetPointDimension (const RegisteredPointSet *dataset, const FeatureList *feature) |
| static int | GetPointIndex (vtkPointSet *dataset, const Array< int > *sample, int index) |
| static int | GetPointIndex (const RegisteredPointSet *dataset, const Array< int > *sample, int index) |
| static vtkSmartPointer< vtkPoints > | GetPoints (vtkPointSet *dataset, const Array< int > *sample) |
| static vtkSmartPointer< vtkPoints > | GetPoints (const RegisteredPointSet *dataset, const Array< int > *sample) |
| static vtkSmartPointer< vtkPointSet > | GetPointSet (vtkPointSet *dataset, const Array< int > *sample) |
| static vtkSmartPointer< vtkPointSet > | GetPointSet (const RegisteredPointSet *dataset, const Array< int > *sample) |
| static PointCorrespondence * | New (TypeId) |
| Construct new instance of specified type. | |
| static PointCorrespondence * | New (const char *) |
| Construct new instance of specified type. | |
| Static Public Member Functions inherited from mirtk::Object | |
| static const char * | NameOfType () |
| Get name of this class type. | |
| Static Protected Member Functions inherited from mirtk::Object | |
| template<typename... Args> | |
| static void | ThrowStatic (ErrorType err, const char *cls, const char *func, Args... args) |
Detailed Description
Closest point correspondence map
This class establishes point correspondence based on a known parcellation of the surfaces, i.e., the discrete "Labels" point data array (cf. MIRTK polydataassignlabels tool). A source point is said to correspond to a target point if it is the closest point on the source surface which has the same label as the target point. If no such point is found, the target point is marked as outlier.
Definition at line 44 of file ClosestPointLabel.h.
Member Function Documentation
§ Init()
|
protected |
Common (re-)initialization steps of this class
- Note
- Must be a non-virtual function!
The documentation for this class was generated from the following file: