#include <FiducialRegistrationError.h>
Inheritance diagram for mirtk::FiducialRegistrationError:
Collaboration diagram for mirtk::FiducialRegistrationError:
Public Member Functions | |
| FiducialRegistrationError (const char *="", double=1.0) | |
| Constructor. | |
| FiducialRegistrationError (const FiducialRegistrationError &) | |
| Copy constructor. | |
| FiducialRegistrationError & | operator= (const FiducialRegistrationError &) |
| Assignment operator. | |
| virtual | ~FiducialRegistrationError () |
| Destructor. | |
 Public Member Functions inherited from mirtk::PointCorrespondenceDistance | |
| bool | DoEvaluateSourceError () const |
| Whether to evaluate source to target error. | |
| bool | DoEvaluateTargetError () const |
| Whether to evaluate target to source error. | |
| virtual void | Initialize () |
| Initialize error measure once input and parameters have been set. | |
| PointCorrespondenceDistance & | operator= (const PointCorrespondenceDistance &) |
| Assignment operator. | |
| virtual ParameterList | Parameter () const |
| Get parameter key/value as string map. | |
| PointCorrespondenceDistance (const char *="", double=1.0) | |
| Constructor. | |
| PointCorrespondenceDistance (const PointCorrespondenceDistance &) | |
| Copy constructor. | |
| virtual void | Reinitialize () |
| Reinitialize error measure after change of input topology. | |
| virtual void | Update (bool=true) |
| Update moving input points and internal state of distance measure. | |
| virtual bool | Upgrade () |
| Update energy term after convergence. | |
| virtual void | WriteDataSets (const char *, const char *, bool=true) const |
| Write input of data fidelity term. | |
| virtual void | WriteGradient (const char *, const char *) const |
| Write gradient of data fidelity term w.r.t each transformed input. | |
| virtual | ~PointCorrespondenceDistance () |
| Destructor. | |
| Public Member Functions inherited from mirtk::PointSetDistance | |
| virtual | ~PointSetDistance () |
| Destructor. | |
| Public Member Functions inherited from mirtk::DataFidelity | |
| virtual | ~DataFidelity () |
| Destructor. | |
| Public Member Functions inherited from mirtk::EnergyTerm | |
| virtual enum EnergyMeasure | EnergyMeasure () const =0 |
| Energy measure implemented by this term. | |
| void | Gradient (double *gradient, double step) |
| virtual void | GradientStep (const double *gradient, double &min, double &max) const |
| double | InitialValue () |
| Returns initial value of energy term. | |
| void | NormalizedGradient (double *gradient, double step) |
| string | Prefix (const char *=NULL) const |
| Prefix to be used for debug output files. | |
| virtual void | Print (Indent=0) const |
| Print debug information. | |
| virtual double | RawValue (double) const |
| double | RawValue () |
| void | ResetInitialValue () |
| Reset initial value of energy term. | |
| void | ResetValue () |
| Reset cached value of energy term. | |
| double | Value () |
| Evaluate energy term. | |
| virtual | ~EnergyTerm () |
| Destructor. | |
| Public Member Functions inherited from mirtk::Configurable | |
| string | DefaultName () const |
| virtual bool | Set (const char *, const char *) |
| Set parameter value from string. | |
| virtual | ~Configurable () |
| Destructor. | |
| Public Member Functions inherited from mirtk::Observable | |
| void | AddObserver (Observer &) |
| Add observer. | |
| void | Broadcast (Event, const void *=NULL) |
| Broadcast event to observers. | |
| void | ClearObservers () |
| Delete all observers. | |
| void | DeleteObserver (Observer &) |
| Delete observer. | |
| void | NotifyObservers (Event, const void *=NULL) |
| Notify all observers about given event if this object has changed. | |
| int | NumberOfObservers () const |
| Number of current observers. | |
| virtual | ~Observable () |
| Destructor. | |
| Public Member Functions inherited from mirtk::Object | |
| virtual const char * | NameOfClass () const =0 |
| Get name of class, which this object is an instance of. | |
| bool | Parameter (const ParameterList &) |
| Set parameters from name/value pairs. | |
| virtual | ~Object () |
| Destructor. | |
Additional Inherited Members | |
| Public Types inherited from mirtk::PointSetDistance | |
| typedef Vector3D< double > | GradientType |
| Type of gradient w.r.t a single transformed data point. | |
| Public Types inherited from mirtk::EnergyTerm | |
| typedef ObjectFactory< enum EnergyMeasure, EnergyTerm > | FactoryType |
| Type of energy term factory. | |
| Static Public Member Functions inherited from mirtk::PointSetDistance | |
| static PointSetDistance * | New (PointSetDistanceMeasure, const char *="", double=1.0) |
| Instantiate specified similarity measure. | |
| Static Public Member Functions inherited from mirtk::EnergyTerm | |
| static FactoryType & | Factory () |
| Get global energy term factory instance. | |
| static EnergyTerm * | New (EnergyMeasure, const char *="", double=1.0) |
| Construct new energy term. | |
| static EnergyTerm * | TryNew (EnergyMeasure, const char *="", double=1.0) |
| Construct new energy term or return nullptr if term not available. | |
| Static Public Member Functions inherited from mirtk::Object | |
| static const char * | NameOfType () |
| Get name of this class type. | |
| Protected Member Functions inherited from mirtk::PointCorrespondenceDistance | |
| virtual double | Evaluate () |
| Evaluate unweighted energy term. | |
| void | EvaluateGradient (double *gradient, double step, double weight) |
| void | ForwardEvent (Observable *, Event, const void *) |
| Forward point correspondence map event. | |
| mirtkAttributeMacro (Array< int >, TargetSample) | |
| Indices of sampled target points. | |
| mirtkAttributeMacro (Array< int >, SourceSample) | |
| Indices of sampled source points. | |
| mirtkAttributeMacro (int, NumberOfUpdates) | |
| Number of invocations of Update modulo _UpdatePeriod. | |
| mirtkComponentMacro (PointCorrespondence, Correspondence) | |
| Point correspondence map. | |
| mirtkComponentMacro (RadialErrorFunction, ErrorFunction) | |
| Polydata registration error weight function. | |
| mirtkPublicAttributeMacro (double, TargetSampleDistance) | |
| Approximate distance between sampled target points. | |
| mirtkPublicAttributeMacro (double, SourceSampleDistance) | |
| Approximate distance between sampled source points. | |
| mirtkPublicAttributeMacro (int, NumberOfTargetSamples) | |
| Maximum number of target samples used. | |
| mirtkPublicAttributeMacro (int, NumberOfSourceSamples) | |
| Maximum number of target samples used. | |
| mirtkPublicAttributeMacro (int, UpdatePeriod) | |
| Number of Update calls between reevaluation of correspondences. | |
| mirtkPublicAttributeMacro (bool, EvaluateTargetError) | |
| Whether to evaluate error of target points and corresponding source points. | |
| mirtkPublicAttributeMacro (bool, EvaluateSourceError) | |
| Whether to evaluate error of source points and corresponding target points. | |
| virtual void | NonParametricGradient (const RegisteredPointSet *source, GradientType *gradient) |
| virtual void | ParametricGradient (const RegisteredPointSet *source, const GradientType *np_gradient, double *gradient, double weight) |
| PointCorrespondenceDistance (const char *, double, PointCorrespondence *, RadialErrorFunction *=NULL) | |
| Construct distance with given default point correspondence type and error function. | |
| void | SamplePoints () |
| Sample point sets. | |
| virtual bool | SetWithoutPrefix (const char *, const char *) |
| Set parameter value from string. | |
| virtual void | WriteDataSet (const char *, const RegisteredPointSet *, const Array< int > &, const PointCorrespondence *) const |
| Write given input data set to specified file. | |
| Protected Member Functions inherited from mirtk::PointSetDistance | |
| void | AllocateGradientWrtSource (int) |
| Allocate memory for (non-parametric) gradient w.r.t points of source. | |
| void | AllocateGradientWrtTarget (int) |
| Allocate memory for (non-parametric) gradient w.r.t points of target. | |
| void | CopyAttributes (const PointSetDistance &, int=-1, int=-1) |
| Copy attributes from other point set distance measure. | |
| void | Initialize (int, int) |
| Initialize distance measure once input and parameters have been set. | |
| mirtkAttributeMacro (bool, InitialUpdate) | |
| Whether Update has not been called since initialization. | |
| mirtkComponentMacro (GradientType, GradientWrtTarget) | |
| Memory for (non-parametric) gradient w.r.t points of target. | |
| mirtkComponentMacro (GradientType, GradientWrtSource) | |
| Memory for (non-parametric) gradient w.r.t points of source. | |
| mirtkPublicAggregateMacro (RegisteredPointSet, Target) | |
| First point set. | |
| mirtkPublicAggregateMacro (RegisteredPointSet, Source) | |
| Second point set. | |
| PointSetDistance & | operator= (const PointSetDistance &) |
| Assignment operator. | |
| PointSetDistance (const char *="", double=1.0) | |
| Constructor. | |
| PointSetDistance (const PointSetDistance &, int=-1, int=-1) | |
| Copy constructor. | |
| void | Reinitialize (int, int) |
| virtual void | WriteGradient (const char *, const RegisteredPointSet *, const GradientType *, const Array< int > *=NULL) const |
| Write gradient of data fidelity term w.r.t each transformed input. | |
| Protected Member Functions inherited from mirtk::DataFidelity | |
| DataFidelity (const char *="", double=1.0) | |
| Constructor. | |
| DataFidelity (const DataFidelity &) | |
| Copy constructor. | |
| DataFidelity & | operator= (const DataFidelity &) |
| Assignment operator. | |
| virtual bool | SetWithPrefix (const char *, const char *) |
| Set parameter value from string. | |
| Protected Member Functions inherited from mirtk::EnergyTerm | |
| EnergyTerm (const char *="", double=1.0) | |
| Constructor. | |
| EnergyTerm (const EnergyTerm &) | |
| Copy constructor. | |
| EnergyTerm & | operator= (const EnergyTerm &) |
| Assignment operator. | |
| Protected Member Functions inherited from mirtk::Configurable | |
| Configurable (const char *="") | |
| Constructor. | |
| Configurable (const Configurable &) | |
| Copy constructor. | |
| string | DefaultPrefix () const |
| Get default object name prefix (if any) | |
| bool | HasName () const |
| Whether this object has an explicit name. | |
| bool | HasPrefix () const |
| Whether this object has either an explicit name or default prefix. | |
| template<class T > | |
| bool | InsertWithPrefix (ParameterList &, string, T) const |
| Insert parameter into name/value list with object name prefix. | |
| bool | InsertWithPrefix (ParameterList &, const ParameterList &) const |
| Insert parameters into name/value list with object name prefix. | |
| Configurable & | operator= (const Configurable &) |
| Assignment operator. | |
| string | ParameterNameWithoutPrefix (const char *) const |
| Get name of parameter without object name prefix. | |
| string | ParameterNameWithPrefix (const string &) const |
| Get name of parameter with default object name prefix. | |
| string | ParameterNameWithPrefix (const char *) const |
| Get name of parameter with default object name prefix. | |
| Protected Member Functions inherited from mirtk::Observable | |
| Observable () | |
| Default constructor. | |
| Observable (const Observable &) | |
| Copy constructor. | |
| Observable & | operator= (const Observable &) |
| Assignment operator. | |
| Protected Member Functions inherited from mirtk::Object | |
| template<typename... Args> | |
| void | Throw (ErrorType err, const char *func, Args... args) const |
| Static Protected Member Functions inherited from mirtk::Object | |
| template<typename... Args> | |
| static void | ThrowStatic (ErrorType err, const char *cls, const char *func, Args... args) |
| Protected Attributes inherited from mirtk::PointCorrespondenceDistance | |
| EventDelegate | _EventDelegate |
| Forwards correspondence map event messages to observers of energy term. | |
Detailed Description
Fiducial registration error (FRE) measure
Definition at line 32 of file FiducialRegistrationError.h.
The documentation for this class was generated from the following file: