#include <ImageTransformation.h>
Inheritance diagram for mirtk::ImageTransformationCache:
Collaboration diagram for mirtk::ImageTransformationCache:
Public Member Functions | |
| ImageTransformationCache () | |
| Constructor. | |
| ImageTransformationCache (const ImageAttributes &attr) | |
| Constructor. | |
| virtual | ~ImageTransformationCache () |
| Destructor. | |
 Public Member Functions inherited from mirtk::GenericImage< RealPixel > | |
| void | Clear () |
| Clear an image. | |
| virtual BaseImage * | Copy () const |
| Create copy of this image. | |
| void | CopyFrom (const VoxelType *) |
| Copy image data from 1D array. | |
| void | CopyFrom (const BaseImage &) |
| Copy image data from other image of same size. | |
| void | CopyFrom (const GenericImage &) |
| Copy image data from other image of same size. | |
| bool | CropPad (int margin=0) |
| Crop/pad image background. | |
| VoxelType * | Data (int=0) |
| Get raw pointer to contiguous image data. | |
| VoxelType * | Data (int, int, int=0, int=0) |
| Get raw pointer to contiguous image data. | |
| const VoxelType * | Data (int=0) const |
| Get raw pointer to contiguous image data. | |
| const VoxelType * | Data (int, int, int=0, int=0) const |
| Get raw pointer to contiguous image data. | |
| virtual void | FlipXT (bool modify_origin=false) |
| Flip x and t axis, always also swaps voxel size. | |
| virtual void | FlipXY (bool modify_origin=false) |
| Flip x and y axis, always also swaps voxel size. | |
| virtual void | FlipXZ (bool modify_origin=false) |
| Flip x and z axis, always also swaps voxel size. | |
| virtual void | FlipYT (bool modify_origin=false) |
| Flip y and t axis, always also swaps voxel size. | |
| virtual void | FlipYZ (bool modify_origin=false) |
| Flip y and z axis, always also swaps voxel size. | |
| virtual void | FlipZT (bool modify_origin=false) |
| Flip z and t axis, always also swaps voxel size. | |
| GenericImage () | |
| Default constructor. | |
| GenericImage (const char *) | |
| Constructor from image file. | |
| GenericImage (int, int, int=1, int=1, VoxelType *data=NULL) | |
| Constructor for given image size. | |
| GenericImage (int, int, int, int, int, VoxelType *data=NULL) | |
| Constructor for given image size. | |
| GenericImage (const ImageAttributes &, VoxelType *data=NULL) | |
| Constructor for given image attributes. | |
| GenericImage (const ImageAttributes &, int, VoxelType *data=NULL) | |
| Constructor for given image attributes. | |
| GenericImage (const BaseImage &) | |
| Copy constructor for image. | |
| GenericImage (const GenericImage &) | |
| Copy constructor for image. | |
| GenericImage (const GenericImage< TVoxel2 > &) | |
| Copy constructor for image of different type. | |
| VoxelType | Get (int) const |
| Function for pixel get access. | |
| VoxelType | Get (int, int, int=0, int=0) const |
| Function for pixel get access. | |
| virtual double | GetAsDouble (int) const |
| Function for pixel get access as double. | |
| virtual double | GetAsDouble (int, int, int=0, int=0) const |
| Function for pixel get access as double. | |
| virtual void | GetAsVector (Vector &, int) const |
| Function for pixel get access as double. | |
| virtual void | GetAsVector (Vector &, int, int, int=0, int=0) const |
| Function for pixel get access as double. | |
| virtual Vector | GetAsVector (int) const |
| Function for pixel get access as double. | |
| virtual Vector | GetAsVector (int, int, int=0, int=0) const |
| Function for pixel get access as double. | |
| RealType | GetAverage (int=1) const |
| virtual void * | GetDataPointer (int=0) |
| Get raw pointer to contiguous image data. | |
| virtual const void * | GetDataPointer (int=0) const |
| Get raw pointer to contiguous image data. | |
| virtual void * | GetDataPointer (int, int, int=0, int=0) |
| Get raw pointer to contiguous image data. | |
| virtual const void * | GetDataPointer (int, int, int=0, int=0) const |
| Get raw pointer to contiguous image data. | |
| virtual int | GetDataType () const |
| Get enumeration value corresponding to voxel type. | |
| virtual double | GetDataTypeMax () const |
| Maximum value a pixel can hold without overflowing. | |
| virtual double | GetDataTypeMin () const |
| Minimum value a pixel can hold without overflowing. | |
| virtual int | GetDataTypeSize () const |
| Get size of each voxel in bytes. | |
| GenericImage | GetFrame (int, int=-1) const |
| Get time instance (i.e., frame) or channel of image. | |
| void | GetFrame (GenericImage &, int, int=-1) const |
| Get time instance (i.e., frame) or channel of image. | |
| virtual void | GetFrame (BaseImage *&, int, int=-1) const |
| Get time instance (i.e., frame) or channel of image. | |
| void | GetMaxPosition (Point &, int=1, int=0) const |
| Get Max Intensity position around the point. | |
| void | GetMinMax (VoxelType &, VoxelType &) const |
| Minimum and maximum pixel values get accessor. | |
| void | GetMinMax (VoxelType &, VoxelType &, VoxelType) const |
| Minimum and maximum pixel values get accessor with padding. | |
| void | GetMinMax (VoxelType *, VoxelType *) const |
| void | GetMinMax (VoxelType *, VoxelType *, VoxelType) const |
| void | GetMinMaxPad (VoxelType *, VoxelType *, VoxelType) const |
| VoxelType * | GetPointerToVoxels (int=0, int=0, int=0, int=0) |
| const VoxelType * | GetPointerToVoxels (int=0, int=0, int=0, int=0) const |
| GenericImage | GetRegion (int, int) const |
| Get image consisting of specified 2D slice. | |
| void | GetRegion (GenericImage &, int, int) const |
| Get image consisting of specified 2D slice. | |
| virtual void | GetRegion (BaseImage *&, int, int) const |
| Get image consisting of specified 2D slice. | |
| GenericImage | GetRegion (int, int, int, int, int, int) const |
| Get image consisting of specified 3D subregion. | |
| void | GetRegion (GenericImage &, int, int, int, int, int, int) const |
| Get image consisting of specified 3D subregion. | |
| virtual void | GetRegion (BaseImage *&, int, int, int, int, int, int) const |
| Get image consisting of specified 3D subregion. | |
| GenericImage | GetRegion (int, int, int, int, int, int, int, int) const |
| Get image consisting of specified 4D subregion. | |
| void | GetRegion (GenericImage &, int, int, int, int, int, int, int, int) const |
| Get image consisting of specified 4D subregion. | |
| virtual void | GetRegion (BaseImage *&, int, int, int, int, int, int, int, int) const |
| Get image consisting of specified 4D subregion. | |
| RealType | GetSD (int=1) const |
| Standard Deviation of the pixels. | |
| void | GravityCenter (Point &, int=1, int=0) const |
| Get Gravity center position of a given window. | |
| virtual void | Initialize () |
| Initialize a previously allocated image. | |
| virtual void | Initialize (const ImageAttributes &, int, VoxelType *data) |
| Initialize an image. | |
| void | Initialize (const ImageAttributes &, int) |
| Initialize an image. | |
| void | Initialize (const ImageAttributes &, VoxelType *data=NULL) |
| Initialize an image. | |
| void | Initialize (int, int, int, int, int, VoxelType *data=NULL) |
| Initialize an image. | |
| void | Initialize (int, int, int=1, int=1, VoxelType *data=NULL) |
| Initialize an image. | |
| RealType | Mean (bool fg=true) const |
| int | N () const |
| Number of vector components per voxel. | |
| operator bool () const | |
| Cast to bool, checks if this image has been initialized and ready for use. | |
| BinaryImage | operator!= (VoxelType) const |
| Get binary mask for voxels which are not equal the scalar. | |
| VoxelType & | operator() (int) |
| Function for pixel access from via operators. | |
| const VoxelType & | operator() (int) const |
| Function for pixel access from via operators. | |
| VoxelType & | operator() (int, int, int=0, int=0) |
| Function for pixel access from via operators. | |
| const VoxelType & | operator() (int, int, int=0, int=0) const |
| Function for pixel access from via operators. | |
| GenericImage | operator* (const GenericImage &) const |
| Multiply images voxel-wise. | |
| GenericImage | operator* (double) const |
| Multiply image by scalar. | |
| GenericImage & | operator*= (const GenericImage &) |
| Multipy voxels. | |
| GenericImage & | operator*= (double) |
| Multiply by scalar. | |
| GenericImage | operator+ (const GenericImage &) const |
| Add images. | |
| GenericImage | operator+ (double) const |
| Add scalar to image. | |
| GenericImage & | operator+= (const GenericImage &) |
| Add image. | |
| GenericImage & | operator+= (double) |
| Add scalar. | |
| GenericImage | operator- (const GenericImage &) const |
| Subtract images. | |
| GenericImage | operator- (double) const |
| Subtract scalar from image. | |
| GenericImage & | operator-= (const GenericImage &) |
| Subtract image. | |
| GenericImage & | operator-= (double) |
| Subtract scalar. | |
| GenericImage | operator/ (const GenericImage &) const |
| Divide images voxel-wise. | |
| GenericImage | operator/ (double) const |
| Divide image by scalar. | |
| GenericImage & | operator/= (const GenericImage &) |
| Divide voxels. | |
| GenericImage & | operator/= (double) |
| Divide by scalar. | |
| GenericImage | operator< (VoxelType) const |
| Clamp image given lower threshold. | |
| GenericImage & | operator<= (VoxelType) |
| Clamp image given lower threshold. | |
| GenericImage & | operator= (VoxelType) |
| Assign constant value to each voxel. | |
| GenericImage< VoxelType > & | operator= (const BaseImage &) |
| Assignment operator with implicit cast to double and then VoxelType. | |
| GenericImage< VoxelType > & | operator= (const GenericImage &) |
| Assignment operator. | |
| GenericImage< VoxelType > & | operator= (const GenericImage< TVoxel2 > &) |
| Assignment operator with implicit cast. | |
| bool | operator== (const GenericImage< TVoxel2 > &) const |
| GenericImage | operator> (VoxelType) const |
| Clamp image given upper threshold. | |
| GenericImage & | operator>= (VoxelType) |
| Clamp image given upper threshold. | |
| void | Put (int, VoxelType) |
| Function for pixel put access. | |
| void | Put (int, int, VoxelType) |
| Function for pixel put access. | |
| void | Put (int, int, int, VoxelType) |
| Function for pixel put access. | |
| void | Put (int, int, int, int, VoxelType) |
| Function for pixel put access. | |
| virtual void | PutAsDouble (int, double) |
| Function for pixel put access. | |
| virtual void | PutAsDouble (int, int, double) |
| Function for pixel put access. | |
| virtual void | PutAsDouble (int, int, int, double) |
| Function for pixel put access. | |
| virtual void | PutAsDouble (int, int, int, int, double) |
| Function for pixel put access. | |
| virtual void | PutAsVector (int, const Vector &) |
| Function for pixel put access. | |
| virtual void | PutAsVector (int, int, const Vector &) |
| Function for pixel put access. | |
| virtual void | PutAsVector (int, int, int, const Vector &) |
| Function for pixel put access. | |
| virtual void | PutAsVector (int, int, int, int, const Vector &) |
| Function for pixel put access. | |
| virtual void | PutBackgroundValueAsDouble (double, bool) |
| Put background value. | |
| void | PutMinMax (VoxelType, VoxelType) |
| Linearly rescale intensities. | |
| virtual void | Read (const char *) |
| Read image from file. | |
| virtual void | ReflectT (bool modify_axes=false) |
| Reflect image along t. | |
| virtual void | ReflectX (bool modify_axes=false) |
| Reflect image along x. | |
| virtual void | ReflectY (bool modify_axes=false) |
| Reflect image along y. | |
| virtual void | ReflectZ (bool modify_axes=false) |
| Reflect image along z. | |
| virtual void | SwapXT (bool modify_axes=true) |
| Swap x and t axis. | |
| virtual void | SwapXY (bool modify_axes=true) |
| Swap x and y axis. | |
| virtual void | SwapXZ (bool modify_axes=true) |
| Swap x and z axis. | |
| virtual void | SwapYT (bool modify_axes=true) |
| Swap y and t axis. | |
| virtual void | SwapYZ (bool modify_axes=true) |
| Swap y and z axis. | |
| virtual void | SwapZT (bool modify_axes=true) |
| Swap z and t axis. | |
| virtual void | Write (const char *) const |
| Write image to file. | |
| ~GenericImage () | |
| Destructor. | |
| Public Member Functions inherited from mirtk::BaseImage | |
| const ImageAttributes & | Attributes () const |
| Gets the image attributes. | |
| void | BoundingBox (int &, int &, int &, int &) const |
| Get 2D bounding box of image foreground. | |
| void | BoundingBox (int &, int &, int &, int &, int &, int &) const |
| Get 3D bounding box of image foreground. | |
| void | BoundingBox (int &, int &, int &, int &, int &, int &, int &, int &) const |
| Get 3D+t bounding box of image foreground. | |
| int | CenterOfForeground (Point ¢er) const |
| int | CenterOfForeground (Point ¢er, double padding) const |
| void | ClearBackgroundValue () |
| Clear background value. | |
| void | ClearMask (bool=false) |
| Clear mask upon n-th call after n preceeding InitializeMask calls. | |
| ImageAttributes | ForegroundDomain (int i1, int j1, int k1, int i2, int j2, int k2, bool orthogonal=true) const |
| ImageAttributes | ForegroundDomain (bool orthogonal=true) const |
| ImageAttributes | ForegroundDomain (double padding, bool orthogonal=true) const |
| VoxelType | Get (int) const |
| Get pixel value at voxel with given index. | |
| VoxelType | Get (int, int, int=0, int=0) const |
| Get pixel value at voxel with given lattice coordinates. | |
| const Matrix & | GetAffineMatrix () const |
| double | GetBackgroundValueAsDouble () const |
| Get background value. | |
| const ImageAttributes & | GetImageAttributes () const |
| const Matrix & | GetImageToWorldMatrix () const |
| Return transformation matrix for image to world coordinates. | |
| BinaryImage * | GetMask (bool=false) |
| Get foreground mask (optionally, take over ownership) | |
| const BinaryImage * | GetMask () const |
| Get foreground mask. | |
| virtual void | GetMinMaxAsDouble (double &, double &) const |
| Minimum and maximum pixel values get accessor. | |
| void | GetMinMaxAsDouble (double *, double *) const |
| Minimum and maximum pixel values get accessor. | |
| int | GetNumberOfVoxels () const |
| void | GetOrientation (double *, double *, double *=NULL) const |
| Get image x- and y-axis and z-axis. | |
| Point | GetOrigin () const |
| Image origin get access. | |
| void | GetOrigin (double &, double &, double &) const |
| Image origin get access. | |
| void | GetOrigin (double &, double &, double &, double &) const |
| Image origin get access. | |
| void | GetPixelSize (double &, double &) const |
| Voxel dimensions get access. | |
| void | GetPixelSize (double &, double &, double &) const |
| Voxel dimensions get access. | |
| void | GetPixelSize (double &, double &, double &, double &) const |
| Voxel dimensions get access. | |
| void | GetPixelSize (double *, double *, double *) const |
| Voxel dimensions get access. | |
| void | GetPixelSize (double *, double *, double *, double *) const |
| Voxel dimensions get access. | |
| void * | GetScalarPointer (int=0, int=0, int=0, int=0) |
| const void * | GetScalarPointer (int=0, int=0, int=0, int=0) const |
| int | GetScalarType () const |
| double | GetScalarTypeMax () const |
| double | GetScalarTypeMin () const |
| int | GetScalarTypeSize () const |
| int | GetT () const |
| Returns the number of voxels in the t-direction. | |
| double | GetTOrigin () const |
| Get temporal origin. | |
| double | GetTSize () const |
| Returns the size of a voxel in the t-direction. | |
| const Matrix & | GetWorldToImageMatrix () const |
| Return transformation matrix for world to image coordinates. | |
| int | GetX () const |
| Returns the number of voxels in the x-direction. | |
| double | GetXSize () const |
| Returns the size of a voxel in the x-direction. | |
| int | GetY () const |
| Returns the number of voxels in the y-direction. | |
| double | GetYSize () const |
| Returns the size of a voxel in the y-direction. | |
| int | GetZ () const |
| Returns the number of voxels in the z-direction. | |
| double | GetZSize () const |
| Returns the size of a voxel in the z-direction. | |
| bool | HasBackground () const |
| Whether any voxel is within background. | |
| bool | HasBackgroundValue () const |
| Whether a background value has been set. | |
| bool | HasMask () const |
| bool | HasSpatialAttributesOf (const BaseImage *) const |
| Checks if this image shares the same spatial attributes with another image. | |
| double | ImageToTime (double) const |
| Image to time coordinate conversion. | |
| void | ImageToWorld (double &, double &) const |
| Image to world coordinate conversion with two doubles. | |
| void | ImageToWorld (double &, double &, double &) const |
| Image to world coordinate conversion with three doubles. | |
| void | ImageToWorld (Point &) const |
| Image to world coordinate conversion with a given point. | |
| void | ImageToWorld (Vector3 &) const |
| Convert vector w.r.t. image axes to vector w.r.t. world axes. | |
| void | ImageToWorld (WorldCoordsImage &i2w, bool _3D=true) const |
| void | ImageToWorld (double *i2w, bool _3D=true) const |
| void | ImageToWorld (PointSet &) const |
| Adds world coordinates of each voxel to given point set. | |
| void | IndexToVoxel (int, int &, int &) const |
| Function to convert index to pixel coordinates. | |
| void | IndexToVoxel (int, int &, int &, int &) const |
| Function to convert index to pixel coordinates. | |
| void | IndexToVoxel (int, int &, int &, int &, int &) const |
| Function to convert index to pixel coordinates. | |
| void | IndexToWorld (int, double &, double &) const |
| Get world coordinates (in mm) of pixl. | |
| void | IndexToWorld (int, double &, double &, double &) const |
| Get world coordinates (in mm) of pixel. | |
| void | IndexToWorld (int, Point &) const |
| Get world coordinates (in mm) of pixel. | |
| Point | IndexToWorld (int) const |
| Get world coordinates (in mm) of pixel. | |
| void | InitializeMask (int t=-1, bool=false) |
| Initialize mask if not done yet or none is set. | |
| bool | IsBackground (int) const |
| Whether voxel is within background without index-out-of-bounds check. | |
| bool | IsBackground (int, int, int=0, int=0) const |
| Whether voxel is within background without index-out-of-bounds check. | |
| bool | IsBoundary (int) const |
| Whether voxel index is at boundary of finite image domain. | |
| bool | IsBoundary (int, int) const |
| Whether voxel indices are at boundary of finite 2D image domain. | |
| bool | IsBoundary (int, int, int) const |
| Whether voxel indices are at boundary of finite 3D image domain. | |
| bool | IsBoundary (int, int, int, int) const |
| Whether voxel indices are at boundary of finite 4D image domain. | |
| bool | IsBoundingBoxInsideForeground (int, int, int, int) const |
| Whether all voxels within a 2D bounding region are inside foreground region. | |
| bool | IsBoundingBoxInsideForeground (int, int, int, int, int, int) const |
| Whether all voxels within a 3D bounding region are inside foreground region. | |
| bool | IsBoundingBoxInsideForeground (int, int, int, int, int, int, int, int) const |
| Whether all voxels within a 4D bounding region are inside foreground region. | |
| bool | IsEmpty () const |
| Whether image is uninitialized. | |
| bool | IsForeground (int) const |
| Whether voxel is within foreground without index-out-of-bounds check. | |
| bool | IsForeground (int, int, int=0, int=0) const |
| Whether voxel is within foreground without index-out-of-bounds check. | |
| bool | IsInFOV (double, double, double) |
| Returns true if point is within the field of view of image. | |
| bool | IsInside (int) const |
| Whether voxel index is within finite image domain. | |
| bool | IsInside (int, int) const |
| Whether voxel indices are within finite 2D image domain. | |
| bool | IsInside (int, int, int) const |
| Whether voxel indices are within finite 3D image domain. | |
| bool | IsInside (int, int, int, int) const |
| Whether voxel indices are within finite 4D image domain. | |
| bool | IsInsideForeground (int) const |
| Whether voxel is index is within finite image domain and part of foreground region. | |
| bool | IsInsideForeground (int, int, int=0, int=0) const |
| Whether voxel indices are within finite image domain and part of foreground region. | |
| bool | IsNextToBackground (int) const |
| Whether at least one neighboring voxel is outside the finite foreground region. | |
| bool | IsNextToBackground (int, int, int=0, int=0) const |
| Whether at least one neighboring voxel is outside the finite foreground region. | |
| bool | IsNextToForeground (int) const |
| Whether at least one neighboring voxel is inside the finite foreground region. | |
| bool | IsNextToForeground (int, int, int=0, int=0) const |
| Whether at least one neighboring voxel is inside the finite foreground region. | |
| bool | IsOutside (int) const |
| Whether voxel is index is outside finite image domain. | |
| bool | IsOutside (int, int) const |
| Whether voxel indices are outside finite 4D image domain. | |
| bool | IsOutside (int, int, int) const |
| Whether voxel indices are outside finite 4D image domain. | |
| bool | IsOutside (int, int, int, int) const |
| Whether voxel indices are outside finite 4D image domain. | |
| bool | IsOutsideForeground (int) const |
| Whether voxel is index is outside finite image domain or part of background region. | |
| bool | IsOutsideForeground (int, int, int=0, int=0) const |
| Whether voxel indices are outside finite image domain or part of background region. | |
| int | NumberOfSpatialVoxels () const |
| Returns the total number of spatial voxels. | |
| int | NumberOfVoxels () const |
| Returns the total number of voxels. | |
| BaseImage & | operator= (const BaseImage &) |
| Assignment operator. | |
| void | Orientation (OrientationCode &, OrientationCode &, OrientationCode &) const |
| Get orientation of axis relative to patient. | |
| bool | OwnsMask () const |
| virtual void | Print (Indent=0) const |
| Print image information. | |
| void | PutAffineMatrix (const Matrix &, bool=false) |
| void | PutBackgroundValueAsDouble (double) |
| Put background value. | |
| void | PutMask (BinaryImage *, bool=false) |
| Set foreground mask. | |
| virtual void | PutMinMaxAsDouble (double, double) |
| Minimum and maximum pixel values put accessor. | |
| void | PutOrientation (double *, double *, double *=NULL) |
| Put image x- and y-axis and z-axis. | |
| void | PutOrigin (const Point &) |
| Image origin put access. | |
| void | PutOrigin (double, double, double) |
| Image origin put access. | |
| void | PutOrigin (double, double, double, double) |
| Image origin put access. | |
| void | PutPixelSize (double, double, double) |
| Voxel dimensions put access. | |
| void | PutPixelSize (double, double, double, double) |
| Voxel dimensions put access. | |
| void | PutTOrigin (double) |
| Put temporal origin. | |
| void | PutTSize (double) |
| Set temporal voxel size, i.e., to zero for vector field and non-zero for temporal sequence. | |
| void | ResetAffineMatrix () |
| void | ResetBackgroundValueAsDouble (double) |
| int | T () const |
| Returns the number of voxels in the t-direction. | |
| double | TimeToImage (double) const |
| Time to image coordinate conversion. | |
| double | TSize () const |
| Returns the size of a voxel in the t-direction. | |
| int | VoxelToIndex (int, int, int=0, int=0) const |
| Function to convert pixel to index. | |
| void | WorldToImage (double &, double &) const |
| World to image coordinate conversion with two doubles. | |
| void | WorldToImage (double &, double &, double &) const |
| World to image coordinate conversion with three doubles. | |
| void | WorldToImage (Point &) const |
| World to image coordinate conversion with a given point. | |
| void | WorldToImage (Vector3 &) const |
| Convert vector w.r.t. world axes to vector w.r.t. image axes. | |
| int | X () const |
| Returns the number of voxels in the x-direction. | |
| double | XSize () const |
| Returns the size of a voxel in the x-direction. | |
| int | Y () const |
| Returns the number of voxels in the y-direction. | |
| double | YSize () const |
| Returns the size of a voxel in the y-direction. | |
| int | Z () const |
| Returns the number of voxels in the z-direction. | |
| double | ZSize () const |
| Returns the size of a voxel in the z-direction. | |
| virtual | ~BaseImage () |
| Destructor. | |
| Public Member Functions inherited from mirtk::Object | |
| virtual const char * | NameOfClass () const =0 |
| Get name of class, which this object is an instance of. | |
| virtual ParameterList | Parameter () const |
| Get parameter name/value pairs. | |
| bool | Parameter (const ParameterList &) |
| Set parameters from name/value pairs. | |
| virtual bool | Set (const char *name, const char *value) |
| virtual | ~Object () |
| Destructor. | |
Additional Inherited Members | |
| Public Types inherited from mirtk::GenericImage< RealPixel > | |
| typedef voxel_info< ScalarType >::RealType | RealScalarType |
| Floating point type corresponding to scalar type of voxel type. | |
| typedef voxel_info< VoxelType >::RealType | RealType |
| typedef voxel_info< VoxelType >::ScalarType | ScalarType |
| Scalar type corresponding to voxel type. | |
| typedef RealPixel | VoxelType |
| Voxel type. | |
| Public Types inherited from mirtk::BaseImage | |
| enum | OrientationCode { , L2R = 1, R2L = 2, P2A = 3, A2P = 4, I2S = 5, S2I = 6 } |
| Orientation codes (same as defined in nifti1_io.h, e.g., NIFTI_L2R) More... | |
| typedef double | VoxelType |
| Static Public Member Functions inherited from mirtk::BaseImage | |
| static BaseImage * | New (const char *) |
| Read file and construct image. | |
| static BaseImage * | New (const BaseImage *) |
| Construct image copy of same type. | |
| static BaseImage * | New (int) |
| Construct image with given voxel type. | |
| Static Public Member Functions inherited from mirtk::Object | |
| static const char * | NameOfType () |
| Get name of this class type. | |
| Protected Member Functions inherited from mirtk::GenericImage< RealPixel > | |
| void | AllocateImage (VoxelType *=NULL) |
| Allocate image memory. | |
| Protected Member Functions inherited from mirtk::BaseImage | |
| BaseImage () | |
| Default constructor. | |
| BaseImage (const ImageAttributes &, int=-1) | |
| Constructor. | |
| BaseImage (const BaseImage &) | |
| Copy constructor. | |
| void | PutAttributes (const ImageAttributes &) |
| Puts attributes of image. | |
| void | UpdateMatrix () |
| Update coordinate transformation. | |
| Protected Member Functions inherited from mirtk::Object | |
| template<typename... Args> | |
| void | Throw (ErrorType err, const char *func, Args... args) const |
| Static Protected Member Functions inherited from mirtk::Object | |
| template<typename... Args> | |
| static void | ThrowStatic (ErrorType err, const char *cls, const char *func, Args... args) |
| Protected Attributes inherited from mirtk::GenericImage< RealPixel > | |
| VoxelType * | _data |
| Pointer to image data. | |
| bool | _dataOwner |
| Whether image data memory itself is owned by this instance. | |
| VoxelType **** | _matrix |
| Protected Attributes inherited from mirtk::BaseImage | |
| ImageAttributes | _attr |
| Image attributes. | |
| double | _bg |
| Background value - may also be NaN for floating point images. | |
| bool | _bgSet |
| Whether a background value was set. | |
| BinaryImage * | _mask |
| Foreground mask. | |
| int | _maskOwner |
| Matrix | _matI2W |
| Transformation matrix from image coordinates to (transformed) world coordinates. | |
| Matrix | _matW2I |
| Transformation matrix from (transformed) world coordinates to image coordinates. | |
| int | _NumberOfVoxels |
| Total number of voxels. | |
Detailed Description
Image used to cache displacements
- Todo:
- Use Vector3D<double> as voxel type to enable the caching of a 4D displacement field which is generated by a 4D transformation or a 3D SV FFD integrated over multiple time intervals.
Definition at line 38 of file ImageTransformation.h.
The documentation for this class was generated from the following file: