| AddObserver(Observer &) | mirtk::Observable | inline |
| ApproximateGradient(RegisteredImage *image, FreeFormTransformation *ffd, double *gradient, double step, double weight) | mirtk::ImageSimilarity | protected |
| ApproximateGradient(RegisteredImage *image, double *gradient, double step, double weight) | mirtk::ImageSimilarity | protected |
| Broadcast(Event, const void *=NULL) | mirtk::Observable | inline |
| ClearObservers() | mirtk::Observable | inline |
| ComputeStatistics(const blocked_range3d< int > &, const RegisteredImage *, RealImage *, RealImage *) | mirtk::NormalizedIntensityCrossCorrelation | protectedvirtual |
| ComputeWeightedAverage(const blocked_range3d< int > &, RealImage *) | mirtk::NormalizedIntensityCrossCorrelation | protectedvirtual |
| Configurable(const char *="") | mirtk::Configurable | protected |
| Configurable(const Configurable &) | mirtk::Configurable | protected |
| CopyAttributes(const ImageSimilarity &) | mirtk::ImageSimilarity | |
| DataFidelity(const char *="", double=1.0) | mirtk::DataFidelity | protected |
| DataFidelity(const DataFidelity &) | mirtk::DataFidelity | protected |
| DefaultName() const | mirtk::Configurable | |
| DefaultPrefix() const | mirtk::Configurable | protected |
| DeleteObserver(Observer &) | mirtk::Observable | inline |
| EnergyMeasure() const =0 | mirtk::EnergyTerm | pure virtual |
| EnergyTerm(const char *="", double=1.0) | mirtk::EnergyTerm | protected |
| EnergyTerm(const EnergyTerm &) | mirtk::EnergyTerm | protected |
| Evaluate() | mirtk::NormalizedIntensityCrossCorrelation | protectedvirtual |
| EvaluateGradient(RegisteredImage *image, GradientImageType *&np_gradient, double *gradient, double step, double weight) | mirtk::ImageSimilarity | protectedvirtual |
| EvaluateGradient(double *gradient, double step, double weight) | mirtk::ImageSimilarity | protectedvirtual |
| Exclude(const blocked_range3d< int > &) | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| Factory() | mirtk::EnergyTerm | static |
| FactoryType typedef | mirtk::EnergyTerm | |
| FG_Domain enum value | mirtk::ImageSimilarity | |
| FG_Mask enum value | mirtk::ImageSimilarity | |
| FG_Overlap enum value | mirtk::ImageSimilarity | |
| FG_Target enum value | mirtk::ImageSimilarity | |
| FG_Union enum value | mirtk::ImageSimilarity | |
| ForegroundRegion enum name | mirtk::ImageSimilarity | |
| Gradient(double *gradient, double step) | mirtk::EnergyTerm | |
| GradientImageType typedef | mirtk::ImageSimilarity | |
| GradientStep(const double *gradient, double &min, double &max) const | mirtk::EnergyTerm | virtual |
| GradientType typedef | mirtk::ImageSimilarity | |
| HasName() const | mirtk::Configurable | protected |
| HasPrefix() const | mirtk::Configurable | protected |
| ImageSimilarity(const char *="", double=1.0) | mirtk::ImageSimilarity | protected |
| ImageSimilarity(const ImageSimilarity &) | mirtk::ImageSimilarity | protected |
| Include(const blocked_range3d< int > &) | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| Initialize() | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| InitializeInput(const ImageAttributes &domain) | mirtk::ImageSimilarity | protectedvirtual |
| InitialValue() | mirtk::EnergyTerm | |
| InsertWithPrefix(ParameterList &, string, T) const | mirtk::Configurable | protected |
| InsertWithPrefix(ParameterList &, const ParameterList &) const | mirtk::Configurable | inlineprotected |
| IntensityCrossCorrelation(const char *="") | mirtk::IntensityCrossCorrelation | |
| IntensityCrossCorrelation(const IntensityCrossCorrelation &) | mirtk::IntensityCrossCorrelation | |
| IsForeground(int) const | mirtk::ImageSimilarity | inline |
| IsForeground(int, int, int) const | mirtk::ImageSimilarity | inline |
| mirtk::ImageSimilarity::mirtkAttributeMacro(bool, InitialUpdate) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkComponentMacro(GradientImageType, GradientWrtTarget) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkComponentMacro(GradientImageType, GradientWrtSource) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkComponentMacro(double, Gradient) | mirtk::ImageSimilarity | |
| mirtkLooseComponentMacro(RegisteredImage, Target) | mirtk::ImageSimilarity | |
| mirtkLooseComponentMacro(RegisteredImage, Source) | mirtk::ImageSimilarity | |
| mirtkPublicAggregateMacro(BinaryImage, Mask) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(ImageAttributes, Domain) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(ForegroundRegion, Foreground) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(int, NumberOfVoxels) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(bool, NormalizeImageGradient) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(bool, UseApproximateGradient) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(double, VoxelWisePreconditioning) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(double, NodeBasedPreconditioning) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(bool, SkipTargetInitialization) | mirtk::ImageSimilarity | |
| mirtk::ImageSimilarity::mirtkPublicAttributeMacro(bool, SkipSourceInitialization) | mirtk::ImageSimilarity | |
| MultiplyByImageGradient(const RegisteredImage *image, GradientImageType *gradient) | mirtk::ImageSimilarity | protected |
| NameOfClass() const =0 | mirtk::Object | pure virtual |
| NameOfType() | mirtk::Object | inlinestatic |
| New(SimilarityMeasure, const char *="", double=1.0) | mirtk::ImageSimilarity | static |
| mirtk::DataFidelity::New(EnergyMeasure, const char *="", double=1.0) | mirtk::EnergyTerm | static |
| NonParametricGradient(const RegisteredImage *, GradientImageType *) | mirtk::NormalizedIntensityCrossCorrelation | protectedvirtual |
| NormalizedGradient(double *gradient, double step) | mirtk::EnergyTerm | |
| NormalizedIntensityCrossCorrelation(const char *="") | mirtk::NormalizedIntensityCrossCorrelation | |
| NormalizedIntensityCrossCorrelation(const NormalizedIntensityCrossCorrelation &) | mirtk::NormalizedIntensityCrossCorrelation | |
| NormalizeGradient(GradientImageType *gradient) | mirtk::ImageSimilarity | protectedvirtual |
| NormalizeGradient(const RegisteredImage *image, double *gradient) | mirtk::ImageSimilarity | protectedvirtual |
| NotifyObservers(Event, const void *=NULL) | mirtk::Observable | inline |
| NumberOfObservers() const | mirtk::Observable | inline |
| Observable() | mirtk::Observable | inlineprotected |
| Observable(const Observable &) | mirtk::Observable | inlineprotected |
| operator=(const IntensityCrossCorrelation &) | mirtk::IntensityCrossCorrelation | |
| mirtk::NormalizedIntensityCrossCorrelation::operator=(const NormalizedIntensityCrossCorrelation &) | mirtk::NormalizedIntensityCrossCorrelation | |
| mirtk::ImageSimilarity::operator=(const ImageSimilarity &) | mirtk::ImageSimilarity | protected |
| mirtk::DataFidelity::operator=(const DataFidelity &) | mirtk::DataFidelity | protected |
| mirtk::EnergyTerm::operator=(const EnergyTerm &) | mirtk::EnergyTerm | protected |
| mirtk::Configurable::operator=(const Configurable &) | mirtk::Configurable | protected |
| mirtk::Observable::operator=(const Observable &) | mirtk::Observable | inlineprotected |
| Parameter() const | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| mirtk::Configurable::Parameter(const ParameterList &) | mirtk::Object | inline |
| ParameterNameWithoutPrefix(const char *) const | mirtk::Configurable | protected |
| ParameterNameWithPrefix(const string &) const | mirtk::Configurable | protected |
| ParameterNameWithPrefix(const char *) const | mirtk::Configurable | protected |
| ParametricGradient(const RegisteredImage *image, GradientImageType *np_gradient, double *gradient, double weight) | mirtk::ImageSimilarity | protectedvirtual |
| Prefix(const char *=NULL) const | mirtk::EnergyTerm | |
| Print(Indent=0) const | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| RawValue(double) const | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| mirtk::ImageSimilarity::RawValue() | mirtk::EnergyTerm | |
| ReleaseSource() | mirtk::ImageSimilarity | |
| ReleaseTarget() | mirtk::ImageSimilarity | |
| ResetInitialValue() | mirtk::EnergyTerm | |
| ResetValue() | mirtk::EnergyTerm | |
| Set(const char *, const char *) | mirtk::Configurable | virtual |
| SetKernelToBoxWindow(double, double=-1, double=-1, Units=UNITS_MM) | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| SetKernelToGaussian(double, double=-1, double=-1, Units=UNITS_MM) | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| SetWithoutPrefix(const char *, const char *) | mirtk::ImageSimilarity | protectedvirtual |
| SetWithPrefix(const char *, const char *) | mirtk::NormalizedIntensityCrossCorrelation | protectedvirtual |
| Throw(ErrorType err, const char *func, Args... args) const | mirtk::Object | protected |
| ThrowStatic(ErrorType err, const char *cls, const char *func, Args... args) | mirtk::Object | protectedstatic |
| TryNew(EnergyMeasure, const char *="", double=1.0) | mirtk::EnergyTerm | static |
| Units enum name | mirtk::NormalizedIntensityCrossCorrelation | |
| Update(bool=true) | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| Upgrade() | mirtk::EnergyTerm | virtual |
| Value() | mirtk::EnergyTerm | |
| VoxelType typedef | mirtk::ImageSimilarity | |
| WriteDataSets(const char *, const char *, bool=true) const | mirtk::NormalizedIntensityCrossCorrelation | virtual |
| WriteGradient(const char *, const char *) const | mirtk::ImageSimilarity | virtual |
| ~Configurable() | mirtk::Configurable | virtual |
| ~DataFidelity() | mirtk::DataFidelity | virtual |
| ~EnergyTerm() | mirtk::EnergyTerm | virtual |
| ~ImageSimilarity() | mirtk::ImageSimilarity | virtual |
| ~IntensityCrossCorrelation() | mirtk::IntensityCrossCorrelation | virtual |
| ~NormalizedIntensityCrossCorrelation() | mirtk::NormalizedIntensityCrossCorrelation | |
| ~Object() | mirtk::Object | inlinevirtual |
| ~Observable() | mirtk::Observable | inlinevirtual |